RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 APOBRQ0VD83 1088 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 TROAPQ12815 778 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 TRDNQ13061 729 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 WTAPQ15007 396 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 FAM83BQ5T0W9 1011 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 ZNF697Q5TEC3 545 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 SLFN13Q68D06 897 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 TTBK2Q6IQ55 1244 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 BLOC1S2Q6QNY1 142 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 CATSPERGQ6ZRH7 1159 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 TRIM67Q6ZTA4 783 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 Q6ZUG5 572 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 ANKRD23Q86SG2 305 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 SGMS1Q86VZ5 419 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 IQCA1Q86XH1 822 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 RAB11FIP4Q86YS3 637 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 STAG2Q8N3U4 1231 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 FBXL16Q8N461 479 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 JMYQ8N9B5 988 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 ZNF592Q92610 1267 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 FEZ1Q99689 392 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 UBAC1Q9BSL1 405 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 MTA3Q9BTC8 594 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 CPVLQ9H3G5 476 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 RPAP3Q9H6T3 665 aaPredicted RBP6.91□□□□□ -1.3
SSX3-201ENST00000298396 MAD2L2Q9UI95 211 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 SYNPO2Q9UMS6 1093 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 ZNF236Q9UL36 1845 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 NID2Q14112 1375 aa6.91□□□□□ -1.3
SSX3-201ENST00000298396 WDR81Q562E7 1941 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 PALM3A6NDB9 673 aaPredicted RBP6.9□□□□□ -1.3
SSX3-201ENST00000298396 ESPNB1AK53 854 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 PDHXO00330 501 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 WDR46O15213 610 aaKnown RBP6.9□□□□□ -1.3
SSX3-201ENST00000298396 CYP2C8P10632 490 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 TAL1P17542 331 aaPredicted RBP6.9□□□□□ -1.3
SSX3-201ENST00000298396 RXRAP19793 462 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 USP14P54578 494 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 EVCP57679 992 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 ZNF543Q08ER8 600 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 ST3GAL1Q11201 340 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 CRHR2Q13324 411 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 GRM4Q14833 912 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 IFIT1BQ5T764 474 aaKnown RBP6.9□□□□□ -1.3
SSX3-201ENST00000298396 APOA5Q6Q788 366 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 KCTD1Q719H9 257 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 NBPF11Q86T75 865 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 ZNF654Q8IZM8 581 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 REPS2Q8NFH8 660 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 DCAF4Q8WV16 495 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 LPAR1Q92633 364 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 BRF1Q92994 677 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 GMCL1Q96IK5 515 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 TMEM87BQ96K49 555 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 P2RX7Q99572 595 aaKnown RBP6.9□□□□□ -1.3
SSX3-201ENST00000298396 ASCC2Q9H1I8 757 aaPredicted RBP6.9□□□□□ -1.3
SSX3-201ENST00000298396 ALDH8A1Q9H2A2 487 aaPredicted RBP6.9□□□□□ -1.3
SSX3-201ENST00000298396 TXNRD2Q9NNW7 524 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 RNF186Q9NXI6 227 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 ADAMTS5Q9UNA0 930 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 MTMR7Q9Y216 660 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 SLC45A1Q9Y2W3 748 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 CYP46A1Q9Y6A2 500 aa6.9□□□□□ -1.3
SSX3-201ENST00000298396 FRMPD2Q68DX3 1309 aaPredicted RBP6.9□□□□□ -1.3
SSX3-201ENST00000298396 DOCK5Q9H7D0 1870 aa6.9□□□□□ -1.31
SSX3-201ENST00000298396 MYH15Q9Y2K3 1946 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 CENPFP49454 3210 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 KLF18A0A0U1RQI7 1052 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 USP17L15C9J2P7 530 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 USP17L13C9JLJ4 530 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 TMEM232C9JQI7 657 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 USP17L11C9JVI0 530 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 USP17L18D6R9N7 530 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 USP17L22D6RA61 530 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 USP17L17D6RBQ6 530 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 USP17L19D6RCP7 530 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 USP17L20D6RJB6 530 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 CYTH3O43739 400 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 DTNBO60941 627 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 PLEKHA8P1O95397 391 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 HMGB1P09429 215 aaKnown RBP6.89□□□□□ -1.31
SSX3-201ENST00000298396 GOLGA8HP0CJ92 632 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 BMP3P12645 472 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 PSMA5P28066 241 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 CTGFP29279 349 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 CDC27P30260 824 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 AK2P54819 239 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 SNAP25P60880 206 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 USP17L24Q0WX57 530 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 SREBF2Q12772 1141 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 CCDC178Q5BJE1 867 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 BTNL9Q6UXG8 535 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 FASTKD5Q7L8L6 764 aaKnown RBP6.89□□□□□ -1.31
SSX3-201ENST00000298396 CCDC144CPQ8IYA2 1237 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 FAM174AQ8TBP5 190 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 ATG4CQ96DT6 458 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 CFHR5Q9BXR6 569 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 TANGO6Q9C0B7 1094 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 SH2D4AQ9H788 454 aa6.89□□□□□ -1.31
SSX3-201ENST00000298396 KAT14Q9H8E8 782 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms