RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 LAMB2P55268 1798 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 MYBL2P10244 700 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 BTDP43251 543 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 TUBB2AQ13885 445 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 ANKRD13CQ8N6S4 541 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 CEP95Q96GE4 821 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 TUBB2BQ9BVA1 445 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 DNAJC5Q9H3Z4 198 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 KIAA1551Q9HCM1 1747 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 USP17L5A8MUK1 530 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 IDEP14735 1019 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 DHTKD1Q96HY7 919 aaPredicted RBP27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 PLEKHA4Q9H4M7 779 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 MLXIPQ9HAP2 919 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 LCMT1Q9UIC8 334 aa27.23■■□□□ 1.95
SPTSSA-201ENST00000298130 POTEMA6NI47 508 aa27.22■■□□□ 1.95
SPTSSA-201ENST00000298130 EXOC4Q96A65 974 aa27.22■■□□□ 1.95
SPTSSA-201ENST00000298130 NUDT12Q9BQG2 462 aa27.22■■□□□ 1.95
SPTSSA-201ENST00000298130 ZMYND12Q9H0C1 365 aa27.22■■□□□ 1.95
SPTSSA-201ENST00000298130 BAG3O95817 575 aa27.22■■□□□ 1.95
SPTSSA-201ENST00000298130 MATR3P43243 847 aaKnown RBP eCLIP27.22■■□□□ 1.95
SPTSSA-201ENST00000298130 USP14P54578 494 aa27.22■■□□□ 1.95
SPTSSA-201ENST00000298130 ARHGEF1Q92888 912 aaKnown RBP27.22■■□□□ 1.95
SPTSSA-201ENST00000298130 KRT86O43790 486 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 CCDC96Q2M329 555 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 FKBP15Q5T1M5 1219 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 NEK8Q86SG6 692 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 C2CD5Q86YS7 1000 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 ANKS1AQ92625 1134 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 IRS2Q9Y4H2 1338 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 EIF3JO75822 258 aaKnown RBP27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 IPO7O95373 1038 aaKnown RBP27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 CXCR5P32302 372 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 CYLC1P35663 651 aaPredicted RBP27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 KRT83P78385 493 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 DAGLBQ8NCG7 672 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 MMRN2Q9H8L6 949 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 EHD2Q9NZN4 543 aa27.21■■□□□ 1.95
SPTSSA-201ENST00000298130 TDP2O95551 362 aa27.2■■□□□ 1.95
SPTSSA-201ENST00000298130 EZH2Q15910 746 aaKnown RBP27.2■■□□□ 1.95
SPTSSA-201ENST00000298130 MEA1Q16626 185 aa27.2■■□□□ 1.95
SPTSSA-201ENST00000298130 SOGA3Q5TF21 947 aa27.2■■□□□ 1.95
SPTSSA-201ENST00000298130 SLC37A4O43826 429 aa27.2■■□□□ 1.94
SPTSSA-201ENST00000298130 HSP90B2PQ58FF3 399 aa27.2■■□□□ 1.94
SPTSSA-201ENST00000298130 WDR66Q8TBY9 1149 aa27.2■■□□□ 1.94
SPTSSA-201ENST00000298130 CAPN6Q9Y6Q1 641 aa27.2■■□□□ 1.94
SPTSSA-201ENST00000298130 MYMKA6NI61 221 aa27.2■■□□□ 1.94
SPTSSA-201ENST00000298130 ZBED6P86452 979 aa27.2■■□□□ 1.94
SPTSSA-201ENST00000298130 TEX11Q8IYF3 940 aa27.2■■□□□ 1.94
SPTSSA-201ENST00000298130 LRRC47Q8N1G4 583 aaKnown RBP27.2■■□□□ 1.94
SPTSSA-201ENST00000298130 CCDC42Q96M95 316 aa27.2■■□□□ 1.94
SPTSSA-201ENST00000298130 RTFDC1Q9BY42 306 aaPredicted RBP27.19■■□□□ 1.94
SPTSSA-201ENST00000298130 KANSL2Q9H9L4 492 aa27.19■■□□□ 1.94
SPTSSA-201ENST00000298130 C6orf50Q9HD87 102 aa27.19■■□□□ 1.94
SPTSSA-201ENST00000298130 SEC63Q9UGP8 760 aaKnown RBP27.19■■□□□ 1.94
SPTSSA-201ENST00000298130 SLURP2P0DP57 97 aa27.19■■□□□ 1.94
SPTSSA-201ENST00000298130 RRP36Q96EU6 259 aaKnown RBP27.19■■□□□ 1.94
SPTSSA-201ENST00000298130 MOCS3O95396 460 aa27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 PAPD7Q5XG87 772 aaKnown RBP27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 TMED8Q6PL24 325 aaPredicted RBP27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 COL22A1Q8NFW1 1626 aaPredicted RBP27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 GRB10Q13322 594 aa27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 PICALMQ13492 652 aa27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 KRT25Q7Z3Z0 450 aa27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 HDAC7Q8WUI4 952 aa27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 CCDC47Q96A33 483 aaKnown RBP27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 C7orf25Q9BPX7 421 aa27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 FAM204AQ9H8W3 233 aa27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 BLOC1S4Q9NUP1 217 aa27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 ARHGAP20Q9P2F6 1191 aa27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 LAMB1P07942 1786 aa27.18■■□□□ 1.94
SPTSSA-201ENST00000298130 PRPHP41219 470 aa27.17■■□□□ 1.94
SPTSSA-201ENST00000298130 DNA2P51530 1060 aa27.17■■□□□ 1.94
SPTSSA-201ENST00000298130 KCNK18Q7Z418 384 aa27.17■■□□□ 1.94
SPTSSA-201ENST00000298130 COG1Q8WTW3 980 aa27.17■■□□□ 1.94
SPTSSA-201ENST00000298130 BICDL2A1A5D9 508 aa27.17■■□□□ 1.94
SPTSSA-201ENST00000298130 KIF5AQ12840 1032 aa27.17■■□□□ 1.94
SPTSSA-201ENST00000298130 REXO1Q8N1G1 1221 aaKnown RBP27.17■■□□□ 1.94
SPTSSA-201ENST00000298130 GBP3Q9H0R5 595 aa27.17■■□□□ 1.94
SPTSSA-201ENST00000298130 GPCPD1Q9NPB8 672 aa27.17■■□□□ 1.94
SPTSSA-201ENST00000298130 TRIM66O15016 1216 aa27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 RPS6KA4O75676 772 aa27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 WDR93Q6P2C0 686 aa27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 CALML4Q96GE6 196 aa27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 TBC1D7Q9P0N9 293 aa27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 CASZ1Q86V15 1759 aa27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 ANKRD65E5RJM6 399 aa27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 NCK2O43639 380 aa27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 SECISBP2LQ93073 1101 aaKnown RBP27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 PNMA5Q96PV4 448 aa27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 ROBO1Q9Y6N7 1651 aa27.16■■□□□ 1.94
SPTSSA-201ENST00000298130 EIF3CLB5ME19 914 aaKnown RBP27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 LAD1O00515 517 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 APBA1Q02410 837 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 UBE2SQ16763 222 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 GALNT17Q6IS24 598 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 RRAGAQ7L523 313 aa27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 EIF3CQ99613 913 aaKnown RBP27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 RTCBQ9Y3I0 505 aaKnown RBP27.15■■□□□ 1.94
SPTSSA-201ENST00000298130 F8W031 263 aaPredicted RBP27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms