RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 SLITRK6Q9H5Y7 841 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 CPSF3Q9UKF6 684 aaKnown RBP7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 TACC3Q9Y6A5 838 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 ZMYM4Q5VZL5 1548 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 MECOMQ03112 1051 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 C8orf34Q49A92 452 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 DSTYKQ6XUX3 929 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 PRIMPOLQ96LW4 560 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 ACCSQ96QU6 501 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 PIGSQ96S52 555 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 METTL14Q9HCE5 456 aaKnown RBP7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 ANAPC5Q9UJX4 755 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 ZCCHC11Q5TAX3 1644 aaKnown RBP7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 ABCA8O94911 1581 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 PRAMEF22A3QJZ6 481 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 DYNC1I1O14576 645 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 PNOCQ13519 176 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 TYW1BQ6NUM6 668 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 RINT1Q6NUQ1 792 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 ARFGAP2Q8N6H7 521 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 FAM49AQ9H0Q0 323 aaPredicted RBP7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 FBXO40Q9UH90 709 aa7.59□□□□□ -1.19
GAPVD1-202ENST00000297933 USP17L5A8MUK1 530 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 RNF8O76064 485 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 MYO1EQ12965 1108 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 RPS6KA1Q15418 735 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 DIXDC1Q155Q3 683 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 PDXDC2PQ6P474 469 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 FAM173BQ6P4H8 233 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 MAP3K4Q9Y6R4 1608 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 GAP43P17677 238 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 ADD1P35611 737 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 MYL7Q01449 175 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 ADAM9Q13443 819 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 CDC37Q16543 378 aaPredicted RBP7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 ADALQ6DHV7 355 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 TMEM179Q6ZVK1 233 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 PRDM5Q9NQX1 630 aaPredicted RBP7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 ATG3Q9NT62 314 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 AMFRQ9UKV5 643 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 NFE2L3Q9Y4A8 694 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 COL15A1P39059 1388 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 UBN2Q6ZU65 1347 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 ADCY9O60503 1353 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 HEXIM1O94992 359 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 TBC1D8O95759 1140 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 ABCB4P21439 1286 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 LONP1P36776 959 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 NFX1Q12986 1120 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 MAP7Q14244 749 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 USP17L2Q6R6M4 530 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 TMTC1Q8IUR5 882 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 C7orf31Q8N865 590 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 SLF1Q9BQI6 1058 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 CHD1O14646 1710 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 RNF123Q5XPI4 1314 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 DENND3A2RUS2 1198 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 LAD1O00515 517 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 DPYSL4O14531 572 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 CIB2O75838 187 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 ADD2P35612 726 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 MFAP3P55082 362 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 ATP2A3Q93084 1043 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 DYNLL2Q96FJ2 89 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 OTUD5Q96G74 571 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 MMP19Q99542 508 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 TM6SF1Q9BZW5 370 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 VPS37BQ9H9H4 285 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 TPCN1Q9ULQ1 816 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 EIF2AK2P19525 551 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 LONRF2Q1L5Z9 754 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 INTS8Q75QN2 995 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 PALM2Q8IXS6 379 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 LCORLQ8N3X6 602 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 GIMAP8Q8ND71 665 aaPredicted RBP7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 URGCPQ8TCY9 931 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 PGBD1Q96JS3 809 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 TRIM56Q9BRZ2 755 aaKnown RBP7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 SLC39A2Q9NP94 309 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 TSKSQ9UJT2 592 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 KIF1BO60333 1816 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 ABCC4O15439 1325 aa7.58□□□□□ -1.2
GAPVD1-202ENST00000297933 GH2P01242 217 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 S100BP04271 92 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 GCFC2P16383 781 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 PTH1RQ03431 593 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 PTK2Q05397 1052 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 FAM26FQ5R3K3 315 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 MYSM1Q5VVJ2 828 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 TBC1D9BQ66K14 1250 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 CCDC121Q6ZUS5 278 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 KLHL7Q8IXQ5 586 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 TRMT44Q8IYL2 757 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 ARHGEF1Q92888 912 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 EPSTI1Q96J88 318 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 TDRD3Q9H7E2 651 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 GPBP1L1Q9HC44 474 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 KCNJ18B7U540 433 aa7.57□□□□□ -1.2
GAPVD1-202ENST00000297933 THAP12O43422 761 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms