RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 SMCR8Q8TEV9 937 aaPredicted RBP21.84■■□□□ 1.09
NKX6-1-201ENST00000295886 CCNL1Q9UK58 526 aaPredicted RBP21.84■■□□□ 1.09
NKX6-1-201ENST00000295886 LRRIQ3A6PVS8 624 aaPredicted RBP21.84■■□□□ 1.09
NKX6-1-201ENST00000295886 USP17L5A8MUK1 530 aa21.84■■□□□ 1.09
NKX6-1-201ENST00000295886 PSMD14O00487 310 aa21.84■■□□□ 1.09
NKX6-1-201ENST00000295886 GALNT17Q6IS24 598 aa21.84■■□□□ 1.09
NKX6-1-201ENST00000295886 UIMC1Q96RL1 719 aa21.84■■□□□ 1.09
NKX6-1-201ENST00000295886 SEMA6BQ9H3T3 888 aa21.84■■□□□ 1.09
NKX6-1-201ENST00000295886 FAN1Q9Y2M0 1017 aa21.84■■□□□ 1.09
NKX6-1-201ENST00000295886 SAR1BQ9Y6B6 198 aa21.84■■□□□ 1.09
NKX6-1-201ENST00000295886 SNED1Q8TER0 1413 aa21.83■■□□□ 1.09
NKX6-1-201ENST00000295886 LAD1O00515 517 aa21.83■■□□□ 1.09
NKX6-1-201ENST00000295886 CCDC102AQ96A19 550 aa21.83■■□□□ 1.09
NKX6-1-201ENST00000295886 COA7Q96BR5 231 aa21.83■■□□□ 1.09
NKX6-1-201ENST00000295886 C6orf50Q9HD87 102 aa21.83■■□□□ 1.09
NKX6-1-201ENST00000295886 EPHB6O15197 1021 aa21.83■■□□□ 1.08
NKX6-1-201ENST00000295886 SOGA3Q5TF21 947 aa21.83■■□□□ 1.08
NKX6-1-201ENST00000295886 KRT25Q7Z3Z0 450 aa21.83■■□□□ 1.08
NKX6-1-201ENST00000295886 RRP36Q96EU6 259 aaKnown RBP21.83■■□□□ 1.08
NKX6-1-201ENST00000295886 SEC63Q9UGP8 760 aaKnown RBP21.83■■□□□ 1.08
NKX6-1-201ENST00000295886 MAST2Q6P0Q8 1798 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 GSTO1P78417 241 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 ATP2B2Q01814 1243 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 GRAPQ13588 217 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 MEA1Q16626 185 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 GRAPLQ8TC17 118 aaPredicted RBP21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 GJA10Q969M2 543 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 SPZ1Q9BXG8 430 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 FAM207AQ9NSI2 230 aaPredicted RBP21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 ZNHIT6Q9NWK9 470 aaKnown RBP21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 AHDC1Q5TGY3 1603 aaPredicted RBP21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 TNRC6CQ9HCJ0 1690 aaKnown RBP21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 MYL1P05976 194 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 PPP4CP60510 307 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 GPSM2P81274 684 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 ZNF804AQ7Z570 1209 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 GSPT2Q8IYD1 628 aaKnown RBP21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 DRC1Q96MC2 740 aa21.82■■□□□ 1.08
NKX6-1-201ENST00000295886 POTEMA6NI47 508 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 ZNF263O14978 683 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 GLIS3Q8NEA6 775 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 C7orf25Q9BPX7 421 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 SLC37A4O43826 429 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 UFL1O94874 794 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 TDP2O95551 362 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 CYLC1P35663 651 aaPredicted RBP21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 KRT83P78385 493 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 GPS2Q13227 327 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 REXO1Q8N1G1 1221 aaKnown RBP21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 TXLNBQ8N3L3 684 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 CCDC47Q96A33 483 aaKnown RBP21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 AK8Q96MA6 479 aa21.81■■□□□ 1.08
NKX6-1-201ENST00000295886 BICDL2A1A5D9 508 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 PDE2AO00408 941 aaPredicted RBP21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 KRT86O43790 486 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 ZBED6P86452 979 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 RAD51AP2Q09MP3 1159 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 C16orf86Q6ZW13 317 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 LRRC47Q8N1G4 583 aaKnown RBP21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 C8orf37Q96NL8 207 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 NUDT12Q9BQG2 462 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 LRWD1Q9UFC0 647 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 LEMD3Q9Y2U8 911 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 MYMKA6NI61 221 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 GNA11P29992 359 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 GRB10Q13322 594 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 TMED8Q6PL24 325 aaPredicted RBP21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 ZFP91Q96JP5 570 aaPredicted RBP21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 JADE2Q9NQC1 790 aa21.8■■□□□ 1.08
NKX6-1-201ENST00000295886 IPO7O95373 1038 aaKnown RBP21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 IDEP14735 1019 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 RFC4P35249 363 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 LRRC41Q15345 812 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 NEDD1Q8NHV4 660 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 NOC3LQ8WTT2 800 aaKnown RBP21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 CALML4Q96GE6 196 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 CUEDC2Q9H467 287 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 CD209Q9NNX6 404 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 BLOC1S4Q9NUP1 217 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 LDHCP07864 332 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 TNNT3P45378 269 aaPredicted RBP21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 USP14P54578 494 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 MRPS25P82663 173 aaKnown RBP21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 CAGE1Q8TC20 777 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 LZTS2Q9BRK4 669 aa21.79■■□□□ 1.08
NKX6-1-201ENST00000295886 SLC20A2Q08357 652 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 PICALMQ13492 652 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 RC3H1Q5TC82 1133 aaKnown RBP21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 C2CD5Q86YS7 1000 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 CCDC155Q8N6L0 562 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 CNBD1Q8NA66 436 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 PSMB7Q99436 277 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 EP400Q96L91 3159 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 MYH1P12882 1939 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 EIF3JO75822 258 aaKnown RBP21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 CALCRLQ16602 461 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 ZSCAN26Q16670 478 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 CCDC96Q2M329 555 aa21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 PAPD7Q5XG87 772 aaKnown RBP21.78■■□□□ 1.08
NKX6-1-201ENST00000295886 PNMA5Q96PV4 448 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms