RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 MDH1P40925 334 aaKnown RBP11.38□□□□□ -0.59
LMX1A-201ENST00000294816 TRADDQ15628 312 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 SLC4A8Q2Y0W8 1093 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 DTHD1Q6ZMT9 781 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 IQCA1Q86XH1 822 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 KIRREL3Q8IZU9 778 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 ZBTB38Q8NAP3 1195 aaPredicted RBP11.38□□□□□ -0.59
LMX1A-201ENST00000294816 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
LMX1A-201ENST00000294816 OR2W6PQ8NHA6 318 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 VCPKMTQ9H867 229 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 DISC1Q9NRI5 854 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 ARHGAP20Q9P2F6 1191 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 PACSIN2Q9UNF0 486 aaPredicted RBP11.38□□□□□ -0.59
LMX1A-201ENST00000294816 PLAAQ9Y263 795 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 SLIT3O75094 1523 aa11.38□□□□□ -0.59
LMX1A-201ENST00000294816 MYO5AQ9Y4I1 1855 aaKnown RBP11.38□□□□□ -0.59
LMX1A-201ENST00000294816 IRS4O14654 1257 aaPredicted RBP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 NKRFO15226 690 aaKnown RBP eCLIP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 RPSAP08865 295 aaKnown RBP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 VEGFAP15692 232 aaPredicted RBP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 SNCBQ16143 134 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 ANKRD40Q6AI12 368 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 RPAINQ86UA6 219 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 CAVIN3Q969G5 261 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 ZSCAN10Q96SZ4 725 aaPredicted RBP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 HAUS2Q9NVX0 235 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 MYH10P35580 1976 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 SIPA1L3O60292 1781 aaPredicted RBP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 SLC5A1P13866 664 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 ARID5AQ03989 594 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 GFPT1Q06210 699 aaPredicted RBP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 PPP2R5AQ15172 486 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 TTI2Q6NXR4 508 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 GPKOWQ92917 476 aaPredicted RBP eCLIP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 P2RX5Q93086 422 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 ATP6V1G3Q96LB4 118 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 PURBQ96QR8 312 aaKnown RBP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 CSF1RP07333 972 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 CLNS1AP54105 237 aaKnown RBP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 CTSWP56202 376 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 PUM3Q15397 648 aaKnown RBP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 FAM114A1Q8IWE2 563 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 RETREG2Q8NC44 543 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 NOX5Q96PH1 765 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 DUSP9Q99956 384 aaKnown RBP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 NLRC4Q9NPP4 1024 aa11.37□□□□□ -0.59
LMX1A-201ENST00000294816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.37□□□□□ -0.59
LMX1A-201ENST00000294816 SPATA31A3Q5VYP0 1347 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 EPHB6O15197 1021 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 NEBLO76041 1014 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 FCER1AP12319 257 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 TMOD1P28289 359 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 BCAMP50895 628 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 CYFIP2Q96F07 1278 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 TTYH3Q9C0H2 523 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 SALL4Q9UJQ4 1053 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 CCDC194A0A1B0GVG4 234 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 LRRC53A6NM62 1247 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 KIF1CO43896 1103 aaKnown RBP11.36□□□□□ -0.59
LMX1A-201ENST00000294816 NMT2O60551 498 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 EZRP15311 586 aaKnown RBP11.36□□□□□ -0.59
LMX1A-201ENST00000294816 GNAT2P19087 354 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 ARID4AP29374 1257 aaPredicted RBP11.36□□□□□ -0.59
LMX1A-201ENST00000294816 LONP1P36776 959 aaKnown RBP11.36□□□□□ -0.59
LMX1A-201ENST00000294816 SLC1A4P43007 532 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 SMTNP53814 917 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 SEC23AQ15436 765 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 CASKIN2Q8WXE0 1202 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 LPIN2Q92539 896 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 MTMR8Q96EF0 704 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 TLR10Q9BXR5 811 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 ATRNO75882 1429 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 FAM107AO95990 144 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 DDR1Q08345 913 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 EHHADHQ08426 723 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 NAA25Q14CX7 972 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 HLFQ16534 295 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 ZNF662Q6ZS27 426 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 IQCKQ8N0W5 287 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 SRBD1Q8N5C6 995 aaKnown RBP11.36□□□□□ -0.59
LMX1A-201ENST00000294816 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.36□□□□□ -0.59
LMX1A-201ENST00000294816 SLC39A2Q9NP94 309 aa11.36□□□□□ -0.59
LMX1A-201ENST00000294816 MYH13Q9UKX3 1938 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 BICDL2A1A5D9 508 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 SCG2P13521 617 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 CCNE1P24864 410 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 GBP2P32456 591 aaPredicted RBP11.35□□□□□ -0.59
LMX1A-201ENST00000294816 STK4Q13043 487 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 FAM47AQ5JRC9 791 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 PARP9Q8IXQ6 854 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 TBC1D31Q96DN5 1066 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 RBM28Q9NW13 759 aaKnown RBP11.35□□□□□ -0.59
LMX1A-201ENST00000294816 GCOM1H8Y6P7 765 aaPredicted RBP11.35□□□□□ -0.59
LMX1A-201ENST00000294816 MYZAPP0CAP1 466 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 NPY5RQ15761 445 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 TMTC3Q6ZXV5 915 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 DNAJC10Q8IXB1 793 aa11.35□□□□□ -0.59
LMX1A-201ENST00000294816 UBLCP1Q8WVY7 318 aaPredicted RBP11.35□□□□□ -0.59
LMX1A-201ENST00000294816 TNFRSF25Q93038 417 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms