RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 SNAP25P60880 206 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 PDE4DQ08499 809 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 USP17L24Q0WX57 530 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 IKQ13123 557 aaPredicted RBP15.72■□□□□ 0.11
NXF1-201ENST00000294172 USP17L6PQ6QN14 398 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 TMEM179Q6ZVK1 233 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 ZNF710Q8N1W2 664 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 DCAF4Q8WV16 495 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 MTMR8Q96EF0 704 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 CDK5RAP3Q96JB5 506 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 LIMA1Q9UHB6 759 aaKnown RBP15.72■□□□□ 0.11
NXF1-201ENST00000294172 DDX25Q9UHL0 483 aaKnown RBP15.72■□□□□ 0.11
NXF1-201ENST00000294172 PCDHA1Q9Y5I3 950 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 C10orf71Q711Q0 1435 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 F5H6K3 240 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 PSMA7O14818 248 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 STX10O60499 249 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 CLK2P49760 499 aaKnown RBP15.72■□□□□ 0.11
NXF1-201ENST00000294172 KLRC3Q07444 240 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 SPAG1Q07617 926 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 CDC37Q16543 378 aaPredicted RBP15.72■□□□□ 0.11
NXF1-201ENST00000294172 CC2D2BQ6DHV5 1058 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 GIMAP8Q8ND71 665 aaPredicted RBP15.72■□□□□ 0.11
NXF1-201ENST00000294172 GJA10Q969M2 543 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 CCDC47Q96A33 483 aaKnown RBP15.72■□□□□ 0.11
NXF1-201ENST00000294172 UIMC1Q96RL1 719 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 CSRNP1Q96S65 589 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 EXOC1Q9NV70 894 aa15.72■□□□□ 0.11
NXF1-201ENST00000294172 TCP10L2B9ZVM9 353 aa15.71■□□□□ 0.11
NXF1-201ENST00000294172 H7C1D1 291 aa15.71■□□□□ 0.11
NXF1-201ENST00000294172 ZSCAN12O43309 604 aa15.71■□□□□ 0.11
NXF1-201ENST00000294172 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
NXF1-201ENST00000294172 RAD17O75943 681 aa15.71■□□□□ 0.11
NXF1-201ENST00000294172 GH2P01242 217 aa15.71■□□□□ 0.11
NXF1-201ENST00000294172 PBX1P40424 430 aa15.71■□□□□ 0.11
NXF1-201ENST00000294172 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.11
NXF1-201ENST00000294172 COPB1P53618 953 aaKnown RBP15.71■□□□□ 0.11
NXF1-201ENST00000294172 AMPD3Q01432 767 aa15.71■□□□□ 0.11
NXF1-201ENST00000294172 TOGARAM2Q6ZUX3 1019 aa15.71■□□□□ 0.11
NXF1-201ENST00000294172 RAB34Q9BZG1 259 aa15.71■□□□□ 0.11
NXF1-201ENST00000294172 PPP2R2CQ9Y2T4 447 aa15.71■□□□□ 0.11
NXF1-201ENST00000294172 CLRN2A0PK11 232 aa15.71■□□□□ 0.1
NXF1-201ENST00000294172 JAG1P78504 1218 aa15.71■□□□□ 0.1
NXF1-201ENST00000294172 GRB10Q13322 594 aa15.71■□□□□ 0.1
NXF1-201ENST00000294172 RBM26Q5T8P6 1007 aaKnown RBP15.71■□□□□ 0.1
NXF1-201ENST00000294172 PPP4R3AQ6IN85 833 aa15.71■□□□□ 0.1
NXF1-201ENST00000294172 TRIM47Q96LD4 638 aa15.71■□□□□ 0.1
NXF1-201ENST00000294172 C7orf25Q9BPX7 421 aa15.71■□□□□ 0.1
NXF1-201ENST00000294172 GREB1LQ9C091 1923 aaPredicted RBP15.7■□□□□ 0.1
NXF1-201ENST00000294172 LRRC10BA6NIK2 292 aa15.7■□□□□ 0.1
NXF1-201ENST00000294172 ENTPD3O75355 529 aa15.7■□□□□ 0.1
NXF1-201ENST00000294172 CASP14P31944 242 aa15.7■□□□□ 0.1
NXF1-201ENST00000294172 POTEAQ6S8J7 498 aa15.7■□□□□ 0.1
NXF1-201ENST00000294172 SV2BQ7L1I2 683 aa15.7■□□□□ 0.1
NXF1-201ENST00000294172 FCHSD1Q86WN1 690 aa15.7■□□□□ 0.1
NXF1-201ENST00000294172 SNX29Q8TEQ0 813 aa15.7■□□□□ 0.1
NXF1-201ENST00000294172 EEF2KMTQ96G04 330 aa15.7■□□□□ 0.1
NXF1-201ENST00000294172 SRRTQ9BXP5 876 aaKnown RBP15.7■□□□□ 0.1
NXF1-201ENST00000294172 SIPA1L1O43166 1804 aa15.7■□□□□ 0.1
NXF1-201ENST00000294172 PES1O00541 588 aaKnown RBP15.69■□□□□ 0.1
NXF1-201ENST00000294172 NDUFB10O96000 172 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 FCER1AP12319 257 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 STK4Q13043 487 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 MCM6Q14566 821 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 KRT79Q5XKE5 535 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 REXO1L1PQ8IX06 675 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 TTLL6Q8N841 843 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 HPS3Q969F9 1004 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 PNMA5Q96PV4 448 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 NUDT12Q9BQG2 462 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 DESI2Q9BSY9 194 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 ZNF277Q9NRM2 450 aaPredicted RBP15.69■□□□□ 0.1
NXF1-201ENST00000294172 PDIA5Q14554 519 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 RRP1BQ14684 758 aaKnown RBP15.69■□□□□ 0.1
NXF1-201ENST00000294172 NAA30Q147X3 362 aaPredicted RBP15.69■□□□□ 0.1
NXF1-201ENST00000294172 MTF1Q14872 753 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 IRF2BP1Q8IU81 584 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 SPICE1Q8N0Z3 855 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 LARGE2Q8N3Y3 721 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 PANX2Q96RD6 677 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 TMOD2Q9NZR1 351 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 RGS17Q9UGC6 210 aaPredicted RBP15.69■□□□□ 0.1
NXF1-201ENST00000294172 DNAI1Q9UI46 699 aa15.69■□□□□ 0.1
NXF1-201ENST00000294172 SOWAHDA6NJG2 315 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 GYPCP04921 128 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 TPM1P09493 284 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 ETF1P62495 437 aaKnown RBP15.68■□□□□ 0.1
NXF1-201ENST00000294172 UBXN1Q04323 297 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 USH1GQ495M9 461 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 CCDC93Q567U6 631 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 RSBN1LQ6PCB5 846 aaPredicted RBP15.68■□□□□ 0.1
NXF1-201ENST00000294172 DYMQ7RTS9 669 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 HAS1Q92839 578 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.68■□□□□ 0.1
NXF1-201ENST00000294172 BLOC1S4Q9NUP1 217 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
NXF1-201ENST00000294172 PSMD14O00487 310 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 MFAP3LO75121 409 aa15.68■□□□□ 0.1
NXF1-201ENST00000294172 FXR1P51114 621 aaKnown RBP eCLIP15.68■□□□□ 0.1
NXF1-201ENST00000294172 CSGALNACT2Q8N6G5 542 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms