RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 MYH1P12882 1939 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 MACROD2A1Z1Q3 448 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 KRT86O43790 486 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 ZBED6P86452 979 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 RAD51AP2Q09MP3 1159 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 NONOQ15233 471 aaKnown RBP eCLIP18.81■□□□□ 0.6
CHRNE-201ENST00000293780 TPTE2Q6XPS3 522 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 KRT26Q7Z3Y9 468 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 MSL3Q8N5Y2 521 aaKnown RBP18.81■□□□□ 0.6
CHRNE-201ENST00000293780 GDAP1L1Q96MZ0 367 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 SEMA6BQ9H3T3 888 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 BIN2Q9UBW5 565 aaPredicted RBP18.81■□□□□ 0.6
CHRNE-201ENST00000293780 MAST2Q6P0Q8 1798 aa18.81■□□□□ 0.6
CHRNE-201ENST00000293780 EIF3CLB5ME19 914 aaKnown RBP18.8■□□□□ 0.6
CHRNE-201ENST00000293780 PDE2AO00408 941 aaPredicted RBP18.8■□□□□ 0.6
CHRNE-201ENST00000293780 ZNF263O14978 683 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 NFIXQ14938 502 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 MUM1L1Q5H9M0 696 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 BARGINQ6ZT62 677 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 WDR66Q8TBY9 1149 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 SMCR8Q8TEV9 937 aaPredicted RBP18.8■□□□□ 0.6
CHRNE-201ENST00000293780 AK8Q96MA6 479 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 EIF3CQ99613 913 aaKnown RBP18.8■□□□□ 0.6
CHRNE-201ENST00000293780 NUP58Q9BVL2 599 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 CUEDC2Q9H467 287 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 TMEM260Q9NX78 707 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 BICDL2A1A5D9 508 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 ZPR1O75312 459 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 BAG3O95817 575 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 KRT25Q7Z3Z0 450 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 POTEDQ86YR6 584 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 AMOTL1Q8IY63 956 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 TBCKQ8TEA7 893 aa18.8■□□□□ 0.6
CHRNE-201ENST00000293780 CDK8P49336 464 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 ZNF662Q6ZS27 426 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 NEK8Q86SG6 692 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 PIGSQ96S52 555 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 EYA3Q99504 573 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 HINFPQ9BQA5 517 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 UBA5Q9GZZ9 404 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 CNTNAP4Q9C0A0 1308 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 EPHB6O15197 1021 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 GNPATO15228 680 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 TUBBP07437 444 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 TXKP42681 527 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 SLC20A2Q08357 652 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 GSPT2Q8IYD1 628 aaKnown RBP18.79■□□□□ 0.6
CHRNE-201ENST00000293780 CCDC47Q96A33 483 aaKnown RBP18.79■□□□□ 0.6
CHRNE-201ENST00000293780 SPZ1Q9BXG8 430 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 LRWD1Q9UFC0 647 aa18.79■□□□□ 0.6
CHRNE-201ENST00000293780 ACTN2P35609 894 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 PPP4CP60510 307 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 ZSCAN29Q8IWY8 852 aaPredicted RBP18.78■□□□□ 0.6
CHRNE-201ENST00000293780 CCDC170Q8IYT3 715 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 RETREG2Q8NC44 543 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 LZTS2Q9BRK4 669 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 MAGEF1Q9HAY2 307 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 C6orf50Q9HD87 102 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 AFF2P51816 1311 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 ERCC3P19447 782 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 TNNT3P45378 269 aaPredicted RBP18.78■□□□□ 0.6
CHRNE-201ENST00000293780 GOLGA5Q8TBA6 731 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 ERGIC2Q96RQ1 377 aa18.78■□□□□ 0.6
CHRNE-201ENST00000293780 RPS6KA4O75676 772 aa18.77■□□□□ 0.6
CHRNE-201ENST00000293780 IDEP14735 1019 aa18.77■□□□□ 0.6
CHRNE-201ENST00000293780 SEMA3FQ13275 785 aa18.77■□□□□ 0.6
CHRNE-201ENST00000293780 HSP90B2PQ58FF3 399 aa18.77■□□□□ 0.6
CHRNE-201ENST00000293780 TMED8Q6PL24 325 aaPredicted RBP18.77■□□□□ 0.6
CHRNE-201ENST00000293780 FAM114A1Q8IWE2 563 aa18.77■□□□□ 0.6
CHRNE-201ENST00000293780 CAGE1Q8TC20 777 aa18.77■□□□□ 0.6
CHRNE-201ENST00000293780 FAM71BQ8TC56 605 aa18.77■□□□□ 0.6
CHRNE-201ENST00000293780 PURBQ96QR8 312 aaKnown RBP18.77■□□□□ 0.6
CHRNE-201ENST00000293780 RTFDC1Q9BY42 306 aaPredicted RBP18.77■□□□□ 0.6
CHRNE-201ENST00000293780 JADE2Q9NQC1 790 aa18.77■□□□□ 0.6
CHRNE-201ENST00000293780 MYMKA6NI61 221 aa18.77■□□□□ 0.59
CHRNE-201ENST00000293780 IPO7O95373 1038 aaKnown RBP18.77■□□□□ 0.59
CHRNE-201ENST00000293780 SYF2O95926 243 aaKnown RBP18.77■□□□□ 0.59
CHRNE-201ENST00000293780 MYBL2P10244 700 aa18.77■□□□□ 0.59
CHRNE-201ENST00000293780 GNA11P29992 359 aa18.77■□□□□ 0.59
CHRNE-201ENST00000293780 BTDP43251 543 aa18.77■□□□□ 0.59
CHRNE-201ENST00000293780 C2orf54Q08AI8 447 aa18.77■□□□□ 0.59
CHRNE-201ENST00000293780 DYMQ7RTS9 669 aa18.77■□□□□ 0.59
CHRNE-201ENST00000293780 EHBP1Q8NDI1 1231 aa18.77■□□□□ 0.59
CHRNE-201ENST00000293780 RRP36Q96EU6 259 aaKnown RBP18.77■□□□□ 0.59
CHRNE-201ENST00000293780 CEP95Q96GE4 821 aa18.77■□□□□ 0.59
CHRNE-201ENST00000293780 CCDC42Q96M95 316 aa18.77■□□□□ 0.59
CHRNE-201ENST00000293780 BLOC1S4Q9NUP1 217 aa18.77■□□□□ 0.59
CHRNE-201ENST00000293780 USP17L5A8MUK1 530 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 VAV2P52735 878 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 GSTO1P78417 241 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 GRB10Q13322 594 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 FKBP15Q5T1M5 1219 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 SOGA3Q5TF21 947 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 CNNM4Q6P4Q7 775 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 FAM207AQ9NSI2 230 aaPredicted RBP18.76■□□□□ 0.59
CHRNE-201ENST00000293780 ARHGAP20Q9P2F6 1191 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 LCMT1Q9UIC8 334 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 SNED1Q8TER0 1413 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 AMPD3Q01432 767 aa18.76■□□□□ 0.59
CHRNE-201ENST00000293780 KIF5AQ12840 1032 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms