RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 TSPY8P0CW00 308 aa21.38■■□□□ 1.01
LSM12-201ENST00000293406 C2orf54Q08AI8 447 aa21.38■■□□□ 1.01
LSM12-201ENST00000293406 CCDC96Q2M329 555 aa21.38■■□□□ 1.01
LSM12-201ENST00000293406 GSPT2Q8IYD1 628 aaKnown RBP21.38■■□□□ 1.01
LSM12-201ENST00000293406 FNBP4Q8N3X1 1017 aaPredicted RBP21.38■■□□□ 1.01
LSM12-201ENST00000293406 SELENOOQ9BVL4 669 aa21.38■■□□□ 1.01
LSM12-201ENST00000293406 LRWD1Q9UFC0 647 aa21.38■■□□□ 1.01
LSM12-201ENST00000293406 CCNT1O60563 726 aaKnown RBP21.38■■□□□ 1.01
LSM12-201ENST00000293406 MYBL2P10244 700 aa21.38■■□□□ 1.01
LSM12-201ENST00000293406 AMPD3Q01432 767 aa21.38■■□□□ 1.01
LSM12-201ENST00000293406 LETM2Q2VYF4 491 aa21.38■■□□□ 1.01
LSM12-201ENST00000293406 TRIM58Q8NG06 486 aa21.38■■□□□ 1.01
LSM12-201ENST00000293406 ZNF263O14978 683 aa21.37■■□□□ 1.01
LSM12-201ENST00000293406 USO1O60763 962 aaKnown RBP21.37■■□□□ 1.01
LSM12-201ENST00000293406 GGCXP38435 758 aa21.37■■□□□ 1.01
LSM12-201ENST00000293406 KRT26Q7Z3Y9 468 aa21.37■■□□□ 1.01
LSM12-201ENST00000293406 RIN2Q8WYP3 895 aaPredicted RBP21.37■■□□□ 1.01
LSM12-201ENST00000293406 IQCDQ96DY2 449 aa21.37■■□□□ 1.01
LSM12-201ENST00000293406 JRKLQ9Y4A0 524 aa21.37■■□□□ 1.01
LSM12-201ENST00000293406 CASZ1Q86V15 1759 aa21.37■■□□□ 1.01
LSM12-201ENST00000293406 SPTY2D1Q68D10 685 aaPredicted RBP21.37■■□□□ 1.01
LSM12-201ENST00000293406 CNNM4Q6P4Q7 775 aa21.37■■□□□ 1.01
LSM12-201ENST00000293406 SMARCC1Q92922 1105 aaPredicted RBP21.37■■□□□ 1.01
LSM12-201ENST00000293406 CDCA7Q9BWT1 371 aaPredicted RBP21.37■■□□□ 1.01
LSM12-201ENST00000293406 ANKRD2Q9GZV1 360 aa21.37■■□□□ 1.01
LSM12-201ENST00000293406 SNX12Q9UMY4 172 aa21.37■■□□□ 1.01
LSM12-201ENST00000293406 STX8Q9UNK0 236 aa21.37■■□□□ 1.01
LSM12-201ENST00000293406 PALM3A6NDB9 673 aaPredicted RBP21.36■■□□□ 1.01
LSM12-201ENST00000293406 TACC1O75410 805 aa21.36■■□□□ 1.01
LSM12-201ENST00000293406 PLEKP08567 350 aaPredicted RBP21.36■■□□□ 1.01
LSM12-201ENST00000293406 NAPAP54920 295 aa21.36■■□□□ 1.01
LSM12-201ENST00000293406 KRT25Q7Z3Z0 450 aa21.36■■□□□ 1.01
LSM12-201ENST00000293406 ZNF444Q8N0Y2 327 aaPredicted RBP21.36■■□□□ 1.01
LSM12-201ENST00000293406 ZMYND12Q9H0C1 365 aa21.36■■□□□ 1.01
LSM12-201ENST00000293406 RSPH14Q9UHP6 348 aa21.36■■□□□ 1.01
LSM12-201ENST00000293406 NONOQ15233 471 aaKnown RBP eCLIP21.35■■□□□ 1.01
LSM12-201ENST00000293406 SLC10A5Q5PT55 438 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 AMOTL1Q8IY63 956 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 LZTS2Q9BRK4 669 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 IFIH1Q9BYX4 1025 aaKnown RBP21.35■■□□□ 1.01
LSM12-201ENST00000293406 PLAGL2Q9UPG8 496 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 NKRFO15226 690 aaKnown RBP eCLIP21.35■■□□□ 1.01
LSM12-201ENST00000293406 GOLGA8HP0CJ92 632 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 TECP42680 631 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 CREG2Q8IUH2 290 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 KIAA0895Q8NCT3 520 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 SMCR8Q8TEV9 937 aaPredicted RBP21.35■■□□□ 1.01
LSM12-201ENST00000293406 HPS3Q969F9 1004 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 TMEM47Q9BQJ4 181 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 SEMA6BQ9H3T3 888 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 MAST2Q6P0Q8 1798 aa21.35■■□□□ 1.01
LSM12-201ENST00000293406 WNK3Q9BYP7 1800 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 HNRNPH3P31942 346 aaKnown RBP21.34■■□□□ 1.01
LSM12-201ENST00000293406 COBLL1Q53SF7 1204 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 C2CD5Q86YS7 1000 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 MARCH10Q8NA82 808 aaPredicted RBP21.34■■□□□ 1.01
LSM12-201ENST00000293406 SH2D4AQ9H788 454 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 FAM184BQ9ULE4 1060 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 PCDHA13Q9Y5I0 950 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 CAPN6Q9Y6Q1 641 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 KLRF2D3W0D1 207 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 VWA3BQ502W6 1294 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 MMGT1Q8N4V1 131 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 SH3RF3Q8TEJ3 882 aaPredicted RBP21.34■■□□□ 1.01
LSM12-201ENST00000293406 CALML4Q96GE6 196 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 SLC39A2Q9NP94 309 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 ARHGAP20Q9P2F6 1191 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 ROBO3Q96MS0 1386 aa21.34■■□□□ 1.01
LSM12-201ENST00000293406 GOLGA6BA6NDN3 693 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 AGPSO00116 658 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 KIF11P52732 1056 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 CENPPQ6IPU0 288 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 NEK8Q86SG6 692 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 TXNRD3Q86VQ6 643 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 SLC44A5Q8NCS7 719 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 AENQ8WTP8 325 aaKnown RBP21.33■■□□□ 1.01
LSM12-201ENST00000293406 DRC1Q96MC2 740 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 NLRP3Q96P20 1036 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 DEF6Q9H4E7 631 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 C6orf50Q9HD87 102 aa21.33■■□□□ 1.01
LSM12-201ENST00000293406 MYH1P12882 1939 aa21.33■■□□□ 1
LSM12-201ENST00000293406 SMCO2A6NFE2 343 aa21.33■■□□□ 1
LSM12-201ENST00000293406 VGLL3A8MV65 326 aa21.33■■□□□ 1
LSM12-201ENST00000293406 PPFIA4O75335 1185 aa21.33■■□□□ 1
LSM12-201ENST00000293406 CPVLQ9H3G5 476 aa21.33■■□□□ 1
LSM12-201ENST00000293406 NDST4Q9H3R1 872 aa21.33■■□□□ 1
LSM12-201ENST00000293406 MLXIPQ9HAP2 919 aa21.33■■□□□ 1
LSM12-201ENST00000293406 FAM207AQ9NSI2 230 aaPredicted RBP21.33■■□□□ 1
LSM12-201ENST00000293406 CCDC88AQ3V6T2 1871 aa21.33■■□□□ 1
LSM12-201ENST00000293406 PRLRP16471 622 aa21.32■■□□□ 1
LSM12-201ENST00000293406 GNA11P29992 359 aa21.32■■□□□ 1
LSM12-201ENST00000293406 TBC1D9BQ66K14 1250 aa21.32■■□□□ 1
LSM12-201ENST00000293406 ZNF572Q7Z3I7 529 aaPredicted RBP21.32■■□□□ 1
LSM12-201ENST00000293406 MMTAG2Q9BU76 263 aaKnown RBP21.32■■□□□ 1
LSM12-201ENST00000293406 SPZ1Q9BXG8 430 aa21.32■■□□□ 1
LSM12-201ENST00000293406 SIK3Q9Y2K2 1263 aa21.32■■□□□ 1
LSM12-201ENST00000293406 MOCS3O95396 460 aa21.32■■□□□ 1
LSM12-201ENST00000293406 LDHBP07195 334 aaKnown RBP21.32■■□□□ 1
LSM12-201ENST00000293406 EIF4A3P38919 411 aaKnown RBP21.32■■□□□ 1
LSM12-201ENST00000293406 ITIH3Q06033 890 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms