RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PPP2R5AQ15172 486 aa14.02□□□□□ -0.16
PTCD1-201ENST00000292478 MAN2A1Q16706 1144 aa14.02□□□□□ -0.16
PTCD1-201ENST00000292478 DOK7Q18PE1 504 aa14.02□□□□□ -0.16
PTCD1-201ENST00000292478 ARL6IP4Q66PJ3 421 aaKnown RBP14.02□□□□□ -0.16
PTCD1-201ENST00000292478 VSIG1Q86XK7 387 aa14.02□□□□□ -0.16
PTCD1-201ENST00000292478 CLTCL1P53675 1640 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 RNF40O75150 1001 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 CD2BP2O95400 341 aaKnown RBP14.02□□□□□ -0.17
PTCD1-201ENST00000292478 MAN1A1P33908 653 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 LCORLQ8N3X6 602 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 ATP2A3Q93084 1043 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 TRIM11Q96F44 468 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 MTA3Q9BTC8 594 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 KIAA1024Q9UPX6 916 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 CRCPO75575 148 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 USP14P54578 494 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 ERFEQ4G0M1 354 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 RSAD2Q8WXG1 361 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 TBC1D31Q96DN5 1066 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 BSDC1Q9NW68 430 aaPredicted RBP14.02□□□□□ -0.17
PTCD1-201ENST00000292478 ZNF215Q9UL58 517 aaPredicted RBP14.02□□□□□ -0.17
PTCD1-201ENST00000292478 CCPG1Q9ULG6 757 aa14.02□□□□□ -0.17
PTCD1-201ENST00000292478 PRAMEF22A3QJZ6 481 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 TCP10L2B9ZVM9 353 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 MFAP3P55082 362 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 CEP85LQ5SZL2 805 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 BRIP1Q9BX63 1249 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 THAP9Q9H5L6 903 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 MAN1B1Q9UKM7 699 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 LAMC1P11047 1609 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 CASP14P31944 242 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 ABCB4P21439 1286 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 PSMC2P35998 433 aaKnown RBP14.01□□□□□ -0.17
PTCD1-201ENST00000292478 RCAN1P53805 252 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 UIMC1Q96RL1 719 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 ADPGKQ9BRR6 497 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 RNF14Q9UBS8 474 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 CDC42BPAQ5VT25 1732 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 NOL3O60936 208 aaKnown RBP14.01□□□□□ -0.17
PTCD1-201ENST00000292478 TBC1D8O95759 1140 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 SERPINB2P05120 415 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 RASSF2P50749 326 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 KIF11P52732 1056 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 LRCH2Q5VUJ6 765 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 EXOC8Q8IYI6 725 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 FAM71BQ8TC56 605 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 ATP6V0A1Q93050 837 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 JPH2Q9BR39 696 aaPredicted RBP14.01□□□□□ -0.17
PTCD1-201ENST00000292478 SEC31BQ9NQW1 1179 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 STAM2O75886 525 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 DYNLL1P63167 89 aaKnown RBP14.01□□□□□ -0.17
PTCD1-201ENST00000292478 GRM1Q13255 1194 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 C10orf76Q5T2E6 689 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 FAM196AQ6ZSG2 479 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 CFAP57Q96MR6 1250 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 DDX23Q9BUQ8 820 aaKnown RBP14.01□□□□□ -0.17
PTCD1-201ENST00000292478 VPS37BQ9H9H4 285 aa14.01□□□□□ -0.17
PTCD1-201ENST00000292478 HSPA1LP34931 641 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 FKBP3Q00688 224 aaKnown RBP14□□□□□ -0.17
PTCD1-201ENST00000292478 DPCR1Q3MIW9 517 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 PDZD4Q76G19 769 aaPredicted RBP14□□□□□ -0.17
PTCD1-201ENST00000292478 GADD45GIP1Q8TAE8 222 aaPredicted RBP14□□□□□ -0.17
PTCD1-201ENST00000292478 MYL7Q01449 175 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 ZSWIM5Q9P217 1185 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 SERPINB13Q9UIV8 391 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 GINS2Q9Y248 185 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 IGSF3O75054 1194 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 AFPP02771 609 aaKnown RBP14□□□□□ -0.17
PTCD1-201ENST00000292478 CCDC170Q8IYT3 715 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 TTLL11Q8NHH1 800 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 STK36Q9NRP7 1315 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 GLI2P10070 1586 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 EIF3CLB5ME19 914 aaKnown RBP14□□□□□ -0.17
PTCD1-201ENST00000292478 LMNB2Q03252 620 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 TFDP1Q14186 410 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 ODR4Q5SWX8 454 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 GKAP1Q5VSY0 366 aaPredicted RBP14□□□□□ -0.17
PTCD1-201ENST00000292478 CC2D2BQ6DHV5 1058 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 DGKHQ86XP1 1220 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 LMNTD2Q8IXW0 634 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 SMCR8Q8TEV9 937 aaPredicted RBP14□□□□□ -0.17
PTCD1-201ENST00000292478 MCUR1Q96AQ8 359 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 EIF3CQ99613 913 aaKnown RBP14□□□□□ -0.17
PTCD1-201ENST00000292478 TMEM206Q9H813 350 aa14□□□□□ -0.17
PTCD1-201ENST00000292478 BUB1O43683 1085 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 C11orf57Q6ZUT1 292 aaPredicted RBP13.99□□□□□ -0.17
PTCD1-201ENST00000292478 NACC1Q96RE7 527 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.99□□□□□ -0.17
PTCD1-201ENST00000292478 GIPC1O14908 333 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 TBCKQ8TEA7 893 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 RIOK1Q9BRS2 568 aaKnown RBP13.99□□□□□ -0.17
PTCD1-201ENST00000292478 SPC25Q9HBM1 224 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 PPANQ9NQ55 473 aaKnown RBP13.99□□□□□ -0.17
PTCD1-201ENST00000292478 PYCARDQ9ULZ3 195 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 TROVE2P10155 538 aaKnown RBP eCLIP13.99□□□□□ -0.17
PTCD1-201ENST00000292478 TPD52P55327 224 aaPredicted RBP13.99□□□□□ -0.17
PTCD1-201ENST00000292478 PTK2Q05397 1052 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 PALM2Q8IXS6 379 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 STAG1Q8WVM7 1258 aa13.99□□□□□ -0.17
PTCD1-201ENST00000292478 MRRFQ96E11 262 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms