RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 ZNF646O15015 1829 aaPredicted RBP21.44■■□□□ 1.02
SHF-201ENST00000290894 PSDA5PKW4 1024 aaPredicted RBP21.44■■□□□ 1.02
SHF-201ENST00000290894 F5H6K3 240 aa21.44■■□□□ 1.02
SHF-201ENST00000290894 KLRC3Q07444 240 aa21.44■■□□□ 1.02
SHF-201ENST00000290894 CDC37Q16543 378 aaPredicted RBP21.44■■□□□ 1.02
SHF-201ENST00000290894 USH1GQ495M9 461 aa21.44■■□□□ 1.02
SHF-201ENST00000290894 TATDN1Q6P1N9 297 aa21.44■■□□□ 1.02
SHF-201ENST00000290894 KCNJ18B7U540 433 aa21.43■■□□□ 1.02
SHF-201ENST00000290894 KCNJ12Q14500 433 aa21.43■■□□□ 1.02
SHF-201ENST00000290894 KCND1Q9NSA2 647 aa21.43■■□□□ 1.02
SHF-201ENST00000290894 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.43■■□□□ 1.02
SHF-201ENST00000290894 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.43■■□□□ 1.02
SHF-201ENST00000290894 V9GYY5 206 aaPredicted RBP21.43■■□□□ 1.02
SHF-201ENST00000290894 PES1O00541 588 aaKnown RBP21.43■■□□□ 1.02
SHF-201ENST00000290894 FKBP1AP62942 108 aaKnown RBP21.43■■□□□ 1.02
SHF-201ENST00000290894 PDE4DQ08499 809 aa21.43■■□□□ 1.02
SHF-201ENST00000290894 STK4Q13043 487 aa21.43■■□□□ 1.02
SHF-201ENST00000290894 GRB10Q13322 594 aa21.43■■□□□ 1.02
SHF-201ENST00000290894 KIF18AQ8NI77 898 aa21.43■■□□□ 1.02
SHF-201ENST00000290894 CALML4Q96GE6 196 aa21.43■■□□□ 1.02
SHF-201ENST00000290894 DDX25Q9UHL0 483 aaKnown RBP21.43■■□□□ 1.02
SHF-201ENST00000290894 SCAF8Q9UPN6 1271 aaKnown RBP21.43■■□□□ 1.02
SHF-201ENST00000290894 CASP14P31944 242 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 MRPL12P52815 198 aaKnown RBP21.42■■□□□ 1.02
SHF-201ENST00000290894 MCM6Q14566 821 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 FILIP1LQ4L180 1135 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 TCP11X2Q5H9J9 407 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 DYMQ7RTS9 669 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 CTAGE1Q96RT6 745 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 SMCHD1A6NHR9 2005 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 SOWAHDA6NJG2 315 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 CLK2P49760 499 aaKnown RBP21.42■■□□□ 1.02
SHF-201ENST00000290894 PPFIBP1Q86W92 1011 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 IRF2BP1Q8IU81 584 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 CDAN1Q8IWY9 1227 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 NYAP2Q9P242 653 aa21.42■■□□□ 1.02
SHF-201ENST00000290894 ARHGAP6O43182 974 aa21.41■■□□□ 1.02
SHF-201ENST00000290894 MARCH6O60337 910 aa21.41■■□□□ 1.02
SHF-201ENST00000290894 RHOBTB3O94955 611 aa21.41■■□□□ 1.02
SHF-201ENST00000290894 NDUFB10O96000 172 aa21.41■■□□□ 1.02
SHF-201ENST00000290894 TMEM179Q6ZVK1 233 aa21.41■■□□□ 1.02
SHF-201ENST00000290894 LARGE2Q8N3Y3 721 aa21.41■■□□□ 1.02
SHF-201ENST00000290894 GIMAP8Q8ND71 665 aaPredicted RBP21.41■■□□□ 1.02
SHF-201ENST00000290894 MTMR8Q96EF0 704 aa21.41■■□□□ 1.02
SHF-201ENST00000290894 TRIM47Q96LD4 638 aa21.41■■□□□ 1.02
SHF-201ENST00000290894 PNMA5Q96PV4 448 aa21.41■■□□□ 1.02
SHF-201ENST00000290894 PPP2R2CQ9Y2T4 447 aa21.41■■□□□ 1.02
SHF-201ENST00000290894 A0A1W2PRG0 241 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 AKR1B15C9JRZ8 316 aaPredicted RBP21.4■■□□□ 1.02
SHF-201ENST00000290894 PSMD14O00487 310 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 PBX1P40424 430 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 COPB1P53618 953 aaKnown RBP21.4■■□□□ 1.02
SHF-201ENST00000290894 KCNK18Q7Z418 384 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 REXO1L1PQ8IX06 675 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 TTLL6Q8N841 843 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 SNX29Q8TEQ0 813 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 HAS1Q92839 578 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 MKL1Q969V6 931 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 CDK5RAP3Q96JB5 506 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 SRRTQ9BXP5 876 aaKnown RBP21.4■■□□□ 1.02
SHF-201ENST00000290894 BLOC1S4Q9NUP1 217 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 EXOC1Q9NV70 894 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 KCNJ6P48051 423 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 FXR1P51114 621 aaKnown RBP eCLIP21.4■■□□□ 1.02
SHF-201ENST00000290894 KCNB1Q14721 858 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 TMEM266Q2M3C6 531 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 CC2D2BQ6DHV5 1058 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 SAMD1Q6SPF0 538 aaPredicted RBP21.4■■□□□ 1.02
SHF-201ENST00000290894 DNAI1Q9UI46 699 aa21.4■■□□□ 1.02
SHF-201ENST00000290894 RNF225M0QZC1 329 aaPredicted RBP21.39■■□□□ 1.02
SHF-201ENST00000290894 CTIFO43310 598 aaKnown RBP21.39■■□□□ 1.02
SHF-201ENST00000290894 GYPCP04921 128 aa21.39■■□□□ 1.02
SHF-201ENST00000290894 ECE1P42892 770 aa21.39■■□□□ 1.02
SHF-201ENST00000290894 ECM1Q16610 540 aa21.39■■□□□ 1.02
SHF-201ENST00000290894 P2RX7Q99572 595 aaKnown RBP21.39■■□□□ 1.02
SHF-201ENST00000290894 SLC39A2Q9NP94 309 aa21.39■■□□□ 1.02
SHF-201ENST00000290894 FANCGO15287 622 aa21.39■■□□□ 1.01
SHF-201ENST00000290894 DPEP1P16444 411 aa21.39■■□□□ 1.01
SHF-201ENST00000290894 RBM26Q5T8P6 1007 aaKnown RBP21.39■■□□□ 1.01
SHF-201ENST00000290894 PPP1R18Q6NYC8 613 aa21.39■■□□□ 1.01
SHF-201ENST00000290894 VEZTQ9HBM0 779 aa21.39■■□□□ 1.01
SHF-201ENST00000290894 LIMA1Q9UHB6 759 aaKnown RBP21.39■■□□□ 1.01
SHF-201ENST00000290894 ZNF215Q9UL58 517 aaPredicted RBP21.39■■□□□ 1.01
SHF-201ENST00000290894 PSMA7O14818 248 aa21.38■■□□□ 1.01
SHF-201ENST00000290894 STX10O60499 249 aa21.38■■□□□ 1.01
SHF-201ENST00000290894 FXR2P51116 673 aaKnown RBP eCLIP21.38■■□□□ 1.01
SHF-201ENST00000290894 MYMKA6NI61 221 aa21.38■■□□□ 1.01
SHF-201ENST00000290894 UBXN1Q04323 297 aa21.38■■□□□ 1.01
SHF-201ENST00000290894 DCAF4Q8WV16 495 aa21.38■■□□□ 1.01
SHF-201ENST00000290894 MAP7D2Q96T17 732 aa21.38■■□□□ 1.01
SHF-201ENST00000290894 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.38■■□□□ 1.01
SHF-201ENST00000290894 COL4A5P29400 1685 aa21.38■■□□□ 1.01
SHF-201ENST00000290894 A0A0U1RQJ8 604 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 SPDYE2BA6NHP3 402 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 SPDYE6P0CI01 402 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 NCBP1Q09161 790 aaKnown RBP21.37■■□□□ 1.01
SHF-201ENST00000290894 STIM1Q13586 685 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 SV2BQ7L1I2 683 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 SUPT20HQ8NEM7 779 aa21.37■■□□□ 1.01
SHF-201ENST00000290894 ATRIPQ8WXE1 791 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms