RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 CETN1Q12798 172 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 TRIM14Q14142 442 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 SCARF1Q14162 830 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 HHIPL2Q6UWX4 724 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 SRGAP1Q7Z6B7 1085 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 VSIG1Q86XK7 387 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 ZNF654Q8IZM8 581 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 TNKSO95271 1327 aa12.56□□□□□ -0.4
NPC1L1-201ENST00000289547 BMP3P12645 472 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 ALDH3A1P30838 453 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 PI16Q6UXB8 463 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 RGS22Q8NE09 1264 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 LMBR1Q8WVP7 490 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 SECISBP2LQ93073 1101 aaKnown RBP12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 MYOZ2Q9NPC6 264 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 RNF40O75150 1001 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 N4BP2L2Q92802 583 aaPredicted RBP12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 RPGRIP1Q96KN7 1286 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 CLTAP09496 248 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 TRIM68Q6AZZ1 485 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 PPP1R14CQ8TAE6 165 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 SH3RF3Q8TEJ3 882 aaPredicted RBP12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 COA7Q96BR5 231 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 GGA3Q9NZ52 723 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 ZHX2Q9Y6X8 837 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 EIF3CLB5ME19 914 aaKnown RBP12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 CTNNA2P26232 953 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 EPHX2P34913 555 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 NONOQ15233 471 aaKnown RBP eCLIP12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 EIF3CQ99613 913 aaKnown RBP12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 HOXC10Q9NYD6 342 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 CDC23Q9UJX2 597 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 STK38LQ9Y2H1 464 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 IKBKGQ9Y6K9 419 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 DISP2A7MBM2 1401 aa12.55□□□□□ -0.4
NPC1L1-201ENST00000289547 GOLGA8KD6RF30 607 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 ZNF157P51786 506 aaPredicted RBP12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 USP17L2Q6R6M4 530 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 IQUBQ8NA54 791 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 HINFPQ9BQA5 517 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 NKIRAS1Q9NYS0 192 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 CTNND2Q9UQB3 1225 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 POLR2DO15514 142 aaKnown RBP12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 CDC25BP30305 580 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 IFT88Q13099 833 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 ANGEL2Q5VTE6 544 aaKnown RBP12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 HAUS3Q68CZ6 603 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 ENTPD3O75355 529 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 STAT2P52630 851 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 KRT71Q3SY84 523 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 CAMKK2Q96RR4 588 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 MLXIPQ9HAP2 919 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 COL3A1P02461 1466 aaPredicted RBP12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 KLRF2D3W0D1 207 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 CDK8P49336 464 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 CACNB3P54284 484 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 HDLBPQ00341 1268 aaKnown RBP12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 SREBF2Q12772 1141 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 LETM2Q2VYF4 491 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 DTHD1Q6ZMT9 781 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 CCDC26Q8TAB7 109 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 PLVAPQ9BX97 442 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 AMNQ9BXJ7 453 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 TM6SF1Q9BZW5 370 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 LRRC4BQ9NT99 713 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 ZBTB21Q9ULJ3 1066 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 MAPK8IP1Q9UQF2 711 aa12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 FRMPD2Q68DX3 1309 aaPredicted RBP12.54□□□□□ -0.4
NPC1L1-201ENST00000289547 COPB2P35606 906 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 TADA2BQ86TJ2 420 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 KLHL7Q8IXQ5 586 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 USP28Q96RU2 1077 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 IQCGQ9H095 443 aaKnown RBP12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 SYNRGQ9UMZ2 1314 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 TRIM31Q9BZY9 425 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 AP5M1Q9H0R1 490 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 TAB2Q9NYJ8 693 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 USP17L10C9JJH3 530 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 M0R2C6 588 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 CELF2O95319 508 aaKnown RBP12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 GUCY2FP51841 1108 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 PRKAG2Q9UGJ0 569 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 FBXO40Q9UH90 709 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 HIP1RO75146 1068 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 DNM2P50570 870 aa12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
NPC1L1-201ENST00000289547 NFAT5O94916 1531 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 KCTD16Q68DU8 428 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 RNF10Q8N5U6 811 aaKnown RBP12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 FAM114A2Q9NRY5 505 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 PHLPP2Q6ZVD8 1323 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 SNAP23O00161 211 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 FOSP01100 380 aaPredicted RBP12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 BRD2P25440 801 aaKnown RBP12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 MCM7P33993 719 aa12.52□□□□□ -0.4
NPC1L1-201ENST00000289547 CA8P35219 290 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms