RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 ALDH5A1P51649 535 aaPredicted RBP29.14■■■□□ 2.26
PDF-201ENST00000288022 Q6ZUG5 572 aa29.14■■■□□ 2.26
PDF-201ENST00000288022 CMTR1Q8N1G2 835 aaKnown RBP29.14■■■□□ 2.26
PDF-201ENST00000288022 ARRDC4Q8NCT1 418 aa29.14■■■□□ 2.26
PDF-201ENST00000288022 TBC1D5Q92609 795 aa29.14■■■□□ 2.26
PDF-201ENST00000288022 RRP36Q96EU6 259 aaKnown RBP29.14■■■□□ 2.26
PDF-201ENST00000288022 XPNPEP3Q9NQH7 507 aa29.14■■■□□ 2.26
PDF-201ENST00000288022 BRPF3Q9ULD4 1205 aa29.14■■■□□ 2.26
PDF-201ENST00000288022 ZBTB43O43298 467 aa29.13■■■□□ 2.25
PDF-201ENST00000288022 SMARCA1P28370 1054 aa29.13■■■□□ 2.25
PDF-201ENST00000288022 DPF3Q92784 378 aa29.13■■■□□ 2.25
PDF-201ENST00000288022 MPHOSPH6Q99547 160 aaKnown RBP29.13■■■□□ 2.25
PDF-201ENST00000288022 SEC63Q9UGP8 760 aaKnown RBP29.13■■■□□ 2.25
PDF-201ENST00000288022 TNRC18O15417 2968 aaPredicted RBP29.12■■■□□ 2.25
PDF-201ENST00000288022 CFBP00751 764 aa29.12■■■□□ 2.25
PDF-201ENST00000288022 CCDC144BQ3MJ40 725 aa29.12■■■□□ 2.25
PDF-201ENST00000288022 GJC2Q5T442 439 aaPredicted RBP29.12■■■□□ 2.25
PDF-201ENST00000288022 EEPD1Q7L9B9 569 aa29.12■■■□□ 2.25
PDF-201ENST00000288022 SRBD1Q8N5C6 995 aaKnown RBP29.12■■■□□ 2.25
PDF-201ENST00000288022 LENG1Q96BZ8 264 aaPredicted RBP29.12■■■□□ 2.25
PDF-201ENST00000288022 MAF1Q9H063 256 aa29.12■■■□□ 2.25
PDF-201ENST00000288022 CCDC82Q8N4S0 544 aa29.11■■■□□ 2.25
PDF-201ENST00000288022 DNERQ8NFT8 737 aa29.11■■■□□ 2.25
PDF-201ENST00000288022 BRF1Q92994 677 aa29.11■■■□□ 2.25
PDF-201ENST00000288022 BAZ2BQ9UIF8 2168 aaKnown RBP29.11■■■□□ 2.25
PDF-201ENST00000288022 GOLGA8AA7E2F4 631 aa29.1■■■□□ 2.25
PDF-201ENST00000288022 GOLGA8BA8MQT2 603 aa29.1■■■□□ 2.25
PDF-201ENST00000288022 KBTBD13C9JR72 458 aa29.1■■■□□ 2.25
PDF-201ENST00000288022 DNM1LO00429 736 aa29.1■■■□□ 2.25
PDF-201ENST00000288022 APOBRQ0VD83 1088 aa29.1■■■□□ 2.25
PDF-201ENST00000288022 RTN1Q16799 776 aa29.1■■■□□ 2.25
PDF-201ENST00000288022 TMTC3Q6ZXV5 915 aa29.1■■■□□ 2.25
PDF-201ENST00000288022 FBXO16Q8IX29 292 aaPredicted RBP29.1■■■□□ 2.25
PDF-201ENST00000288022 SYTL5Q8TDW5 730 aaPredicted RBP29.1■■■□□ 2.25
PDF-201ENST00000288022 KATNBL1Q9H079 304 aa29.1■■■□□ 2.25
PDF-201ENST00000288022 RBM28Q9NW13 759 aaKnown RBP29.1■■■□□ 2.25
PDF-201ENST00000288022 LRRC37A2A6NM11 1700 aa29.09■■■□□ 2.25
PDF-201ENST00000288022 LOC102724159A0A0B4J2E5 919 aa29.09■■■□□ 2.25
PDF-201ENST00000288022 B4DLN1 442 aa29.09■■■□□ 2.25
PDF-201ENST00000288022 EIF5BO60841 1220 aaKnown RBP29.09■■■□□ 2.25
PDF-201ENST00000288022 PGK1P00558 417 aa29.09■■■□□ 2.25
PDF-201ENST00000288022 MRPL12P52815 198 aaKnown RBP29.09■■■□□ 2.25
PDF-201ENST00000288022 PDE4DQ08499 809 aa29.09■■■□□ 2.25
PDF-201ENST00000288022 PWP2Q15269 919 aaKnown RBP29.09■■■□□ 2.25
PDF-201ENST00000288022 MORC4Q8TE76 937 aa29.09■■■□□ 2.25
PDF-201ENST00000288022 LRRC41Q15345 812 aa29.08■■■□□ 2.25
PDF-201ENST00000288022 NOL8Q76FK4 1167 aaKnown RBP29.08■■■□□ 2.25
PDF-201ENST00000288022 RUFY3Q7L099 469 aa29.08■■■□□ 2.25
PDF-201ENST00000288022 TAAR1Q96RJ0 339 aa29.08■■■□□ 2.25
PDF-201ENST00000288022 VTA1Q9NP79 307 aa29.08■■■□□ 2.25
PDF-201ENST00000288022 CYP46A1Q9Y6A2 500 aa29.08■■■□□ 2.25
PDF-201ENST00000288022 OPLAHO14841 1288 aa29.07■■■□□ 2.24
PDF-201ENST00000288022 RNF180Q86T96 592 aa29.07■■■□□ 2.24
PDF-201ENST00000288022 SENP6Q9GZR1 1112 aaPredicted RBP29.07■■■□□ 2.24
PDF-201ENST00000288022 ZSWIM6Q9HCJ5 1215 aa29.07■■■□□ 2.24
PDF-201ENST00000288022 COL20A1Q9P218 1284 aa29.07■■■□□ 2.24
PDF-201ENST00000288022 DUSP11O75319 330 aaKnown RBP29.06■■■□□ 2.24
PDF-201ENST00000288022 COL6A1P12109 1028 aa29.06■■■□□ 2.24
PDF-201ENST00000288022 ADCYAP1R1P41586 468 aa29.06■■■□□ 2.24
PDF-201ENST00000288022 HSD17B4P51659 736 aa29.06■■■□□ 2.24
PDF-201ENST00000288022 TNFAIP2Q03169 654 aa29.06■■■□□ 2.24
PDF-201ENST00000288022 NSUN6Q8TEA1 469 aaKnown RBP29.06■■■□□ 2.24
PDF-201ENST00000288022 RMDN3Q96TC7 470 aa29.06■■■□□ 2.24
PDF-201ENST00000288022 SYNRGQ9UMZ2 1314 aa29.05■■■□□ 2.24
PDF-201ENST00000288022 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.05■■■□□ 2.24
PDF-201ENST00000288022 hCG_1642624A0A1W2PR95 340 aa29.05■■■□□ 2.24
PDF-201ENST00000288022 ADCY6O43306 1168 aa29.05■■■□□ 2.24
PDF-201ENST00000288022 HOXA13P31271 388 aaPredicted RBP29.05■■■□□ 2.24
PDF-201ENST00000288022 METAP2P50579 478 aaKnown RBP eCLIP29.05■■■□□ 2.24
PDF-201ENST00000288022 RCAN1P53805 252 aa29.05■■■□□ 2.24
PDF-201ENST00000288022 ARHGEF16Q5VV41 709 aa29.05■■■□□ 2.24
PDF-201ENST00000288022 UPF3BQ9BZI7 483 aaKnown RBP29.05■■■□□ 2.24
PDF-201ENST00000288022 TM6SF1Q9BZW5 370 aa29.05■■■□□ 2.24
PDF-201ENST00000288022 SPC25Q9HBM1 224 aa29.05■■■□□ 2.24
PDF-201ENST00000288022 PDGFCQ9NRA1 345 aa29.05■■■□□ 2.24
PDF-201ENST00000288022 MAP3K20Q9NYL2 800 aaKnown RBP29.05■■■□□ 2.24
PDF-201ENST00000288022 GCOM1H8Y6P7 765 aaPredicted RBP29.04■■■□□ 2.24
PDF-201ENST00000288022 EVI5O60447 810 aa29.04■■■□□ 2.24
PDF-201ENST00000288022 POLR2MP0CAP2 368 aa29.04■■■□□ 2.24
PDF-201ENST00000288022 TAPT1Q6NXT6 567 aa29.04■■■□□ 2.24
PDF-201ENST00000288022 FBXL16Q8N461 479 aa29.04■■■□□ 2.24
PDF-201ENST00000288022 SAMD3Q8N6K7 520 aa29.04■■■□□ 2.24
PDF-201ENST00000288022 EIF2AK2P19525 551 aaKnown RBP29.03■■■□□ 2.24
PDF-201ENST00000288022 EDNRBP24530 442 aa29.03■■■□□ 2.24
PDF-201ENST00000288022 GHRHRQ02643 423 aa29.03■■■□□ 2.24
PDF-201ENST00000288022 IQSEC1Q6DN90 963 aa29.03■■■□□ 2.24
PDF-201ENST00000288022 AGXT2Q9BYV1 514 aa29.03■■■□□ 2.24
PDF-201ENST00000288022 MKI67P46013 3256 aaKnown RBP29.03■■■□□ 2.24
PDF-201ENST00000288022 CNTNAP5Q8WYK1 1306 aa29.02■■■□□ 2.24
PDF-201ENST00000288022 CCDC196A0A1B0GTZ2 297 aa29.02■■■□□ 2.24
PDF-201ENST00000288022 ADAMTS4O75173 837 aa29.02■■■□□ 2.24
PDF-201ENST00000288022 C6orf222P0C671 652 aaPredicted RBP29.02■■■□□ 2.24
PDF-201ENST00000288022 CDC27P30260 824 aa29.02■■■□□ 2.24
PDF-201ENST00000288022 PRPF38BQ5VTL8 546 aaKnown RBP29.02■■■□□ 2.24
PDF-201ENST00000288022 NR2E3Q9Y5X4 410 aa29.02■■■□□ 2.24
PDF-201ENST00000288022 PDE4DIPQ5VU43 2346 aa29.02■■■□□ 2.24
PDF-201ENST00000288022 SMPD1P17405 629 aa29.01■■■□□ 2.23
PDF-201ENST00000288022 PPP2R5BQ15173 497 aa29.01■■■□□ 2.23
PDF-201ENST00000288022 HEATR3Q7Z4Q2 680 aa29.01■■■□□ 2.23
PDF-201ENST00000288022 FCHSD1Q86WN1 690 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms