RNA–Protein interactions for RNA: ENST00000282223.11

SPOCK1-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5 BASIC

Gene SPOCK1, Length 4,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-201ENST00000282223 MYL1P05976 194 aa8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 SKIP12755 728 aa8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 FDPSP14324 419 aaKnown RBP8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 GNAT2P19087 354 aa8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 TFCP2Q12800 502 aa8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 MPP3Q13368 585 aa8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 SPTY2D1Q68D10 685 aaPredicted RBP8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 LMBRD2Q68DH5 695 aaPredicted RBP8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 PPP4R3AQ6IN85 833 aa8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 YTHDF3Q7Z739 585 aaKnown RBP8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 SCYL3Q8IZE3 742 aa8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 MAB21L3Q8N8X9 362 aa8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 MCUR1Q96AQ8 359 aa8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 PRMT1Q99873 361 aaKnown RBP8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 MOV10L1Q9BXT6 1211 aaKnown RBP8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 DDX47Q9H0S4 455 aaKnown RBP8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 ARHGEF10LQ9HCE6 1279 aa8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 DNAAF2Q9NVR5 837 aaKnown RBP8.52□□□□□ -1.04
SPOCK1-201ENST00000282223 BTBD11A6QL63 1104 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 SHBGP04278 402 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 EEF2P13639 858 aaKnown RBP8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 CHN1P15882 459 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 NANOGNBQ7Z5D8 188 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 ILDR1Q86SU0 546 aaPredicted RBP8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 VPS52Q8N1B4 723 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 YIPF2Q9BWQ6 316 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 FBXO3Q9UK99 471 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 TBC1D2BQ9UPU7 963 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 CAPN6Q9Y6Q1 641 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 PSMA7O14818 248 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 FESP07332 822 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 LINGO3P0C6S8 592 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 ERCC5P28715 1186 aaPredicted RBP8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 ALDH3A1P30838 453 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 MAGEA10P43363 369 aaPredicted RBP8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 MSL3Q8N5Y2 521 aaKnown RBP8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 XPO6Q96QU8 1125 aaKnown RBP8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 NDNQ99608 321 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 TCHPQ9BT92 498 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 FGFR1OP2Q9NVK5 253 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 ARPP21Q9UBL0 812 aaPredicted RBP8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 GDAQ9Y2T3 454 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 ATP5J2-PTCD1G3V325 749 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 HNRNPRO43390 633 aaKnown RBP8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 PTCD1O75127 700 aaKnown RBP8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 ALDH1L1O75891 902 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 SERPINB3P29508 390 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 STX2P32856 288 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 PLTPP55058 493 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 BLMHQ13867 455 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 TRIM14Q14142 442 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 ZMYM1Q5SVZ6 1142 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 MIGA2Q7L4E1 593 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 LRRC8CQ8TDW0 803 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 SMC6Q96SB8 1091 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 GOLPH3Q9H4A6 298 aa8.52□□□□□ -1.05
SPOCK1-201ENST00000282223 ARHGEF40Q8TER5 1519 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 CFAP73A6NFT4 308 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 B4E1Z4 1266 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 KRIT1O00522 736 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 DNAJC6O75061 913 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 PLEKP08567 350 aaPredicted RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 EIF4A3P38919 411 aaKnown RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 IFI16Q16666 785 aaKnown RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 LRRC36Q1X8D7 754 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 E9PCH4 1651 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 UBE2Q2LH0YL09 131 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 DAPK3O43293 454 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 CCDC92Q53HC0 331 aaPredicted RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 DENND2CQ68D51 928 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 SPATA24Q86W54 205 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 ARHGAP18Q8N392 663 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 NMD3Q96D46 503 aaKnown RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 UBE2OQ9C0C9 1292 aaKnown RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 UBAP1Q9NZ09 502 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 TBK1Q9UHD2 729 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 FAF1Q9UNN5 650 aaPredicted RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 PCDHB6Q9Y5E3 794 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 SLC4A4Q9Y6R1 1079 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 SHANK2Q9UPX8 1470 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 PSMD14O00487 310 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 SASH1O94885 1247 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 STAT6P42226 847 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 AMPD2Q01433 879 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 XRCC4Q13426 336 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 MKRN4PQ13434 485 aaPredicted RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 RPS6KA1Q15418 735 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 CDC37Q16543 378 aaPredicted RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 SLC44A4Q53GD3 710 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 SH2D4BQ5SQS7 431 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 UBE3BQ7Z3V4 1068 aa8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 PRPF31Q8WWY3 499 aaKnown RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 ZNF274Q96GC6 653 aaPredicted RBP8.51□□□□□ -1.05
SPOCK1-201ENST00000282223 RAPGEF1Q13905 1077 aa8.5□□□□□ -1.05
SPOCK1-201ENST00000282223 KCTD21Q4G0X4 260 aa8.5□□□□□ -1.05
SPOCK1-201ENST00000282223 CDCA2Q69YH5 1023 aaPredicted RBP8.5□□□□□ -1.05
SPOCK1-201ENST00000282223 GRAMD4Q6IC98 578 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms