RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 DYMQ7RTS9 669 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 NUDT12Q9BQG2 462 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 IMPACTQ9P2X3 320 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 DDX25Q9UHL0 483 aaKnown RBP20.2■□□□□ 0.82
CAPN1-201ENST00000279247 SMCHD1A6NHR9 2005 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 ENTPD3O75355 529 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 VSTM4Q8IW00 320 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 TAOK3Q9H2K8 898 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 SIPA1L1O43166 1804 aa20.2■□□□□ 0.82
CAPN1-201ENST00000279247 LAD1O00515 517 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 SSBP05455 408 aaKnown RBP eCLIP20.19■□□□□ 0.82
CAPN1-201ENST00000279247 PYM1Q9BRP8 204 aaKnown RBP20.19■□□□□ 0.82
CAPN1-201ENST00000279247 VPS16Q9H269 839 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 VIL1P09327 827 aaKnown RBP20.19■□□□□ 0.82
CAPN1-201ENST00000279247 ZFP91Q96JP5 570 aaPredicted RBP20.19■□□□□ 0.82
CAPN1-201ENST00000279247 PSMD1Q99460 953 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 CCSER1Q9C0I3 900 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 ZNRF3Q9ULT6 936 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 EGFRP00533 1210 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 BMP3P12645 472 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 PRPHP41219 470 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 PAK1Q13153 545 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 CCDC150Q8NCX0 1101 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 CALML4Q96GE6 196 aa20.19■□□□□ 0.82
CAPN1-201ENST00000279247 MMTAG2Q9BU76 263 aaKnown RBP20.19■□□□□ 0.82
CAPN1-201ENST00000279247 hCG_1984214I3L0E3 225 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 KIAA1755Q5JYT7 1200 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 CCDC174Q6PII3 467 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 ILDR2Q71H61 639 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 FCHSD1Q86WN1 690 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 ZNF713Q8N859 430 aaPredicted RBP20.18■□□□□ 0.82
CAPN1-201ENST00000279247 SNX29Q8TEQ0 813 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 MCM6Q14566 821 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 TMEM266Q2M3C6 531 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 FAM83BQ5T0W9 1011 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 ZNF658Q5TYW1 1059 aaPredicted RBP20.18■□□□□ 0.82
CAPN1-201ENST00000279247 DCAF4Q8WV16 495 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 GLIS2Q9BZE0 524 aaPredicted RBP20.18■□□□□ 0.82
CAPN1-201ENST00000279247 GJA3Q9Y6H8 435 aa20.18■□□□□ 0.82
CAPN1-201ENST00000279247 IDEP14735 1019 aa20.17■□□□□ 0.82
CAPN1-201ENST00000279247 JDP2Q8WYK2 163 aa20.17■□□□□ 0.82
CAPN1-201ENST00000279247 MKL1Q969V6 931 aa20.17■□□□□ 0.82
CAPN1-201ENST00000279247 TAB2Q9NYJ8 693 aa20.17■□□□□ 0.82
CAPN1-201ENST00000279247 FCER1AP12319 257 aa20.17■□□□□ 0.82
CAPN1-201ENST00000279247 PMS1P54277 932 aaKnown RBP20.17■□□□□ 0.82
CAPN1-201ENST00000279247 PDE4DQ08499 809 aa20.17■□□□□ 0.82
CAPN1-201ENST00000279247 SYDE2Q5VT97 1194 aa20.17■□□□□ 0.82
CAPN1-201ENST00000279247 KIFC2Q96AC6 838 aa20.17■□□□□ 0.82
CAPN1-201ENST00000279247 FBXO11Q86XK2 927 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 GMLQ99445 158 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 RMND1Q9NWS8 449 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 NRDCO43847 1150 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 ERCC3P19447 782 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 RAD51AP2Q09MP3 1159 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 MTMR9Q96QG7 549 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 ARID3AQ99856 593 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 KBTBD4Q9NVX7 518 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 PPP4R3BQ5MIZ7 849 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 FAM177A1Q8N128 213 aaPredicted RBP20.16■□□□□ 0.82
CAPN1-201ENST00000279247 P2RX7Q99572 595 aaKnown RBP20.16■□□□□ 0.82
CAPN1-201ENST00000279247 AMNQ9BXJ7 453 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 ANO3Q9BYT9 981 aa20.16■□□□□ 0.82
CAPN1-201ENST00000279247 FHDC1Q9C0D6 1143 aaPredicted RBP20.16■□□□□ 0.82
CAPN1-201ENST00000279247 UBXN2AP68543 259 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 SPECC1LQ69YQ0 1117 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 SLC30A10Q6XR72 485 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 CCAR2Q8N163 923 aaKnown RBP20.15■□□□□ 0.82
CAPN1-201ENST00000279247 FAM151AQ8WW52 585 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 AK8Q96MA6 479 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 MYH7BA7E2Y1 1941 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 WNT10BO00744 389 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 RIOK3O14730 519 aaKnown RBP20.15■□□□□ 0.82
CAPN1-201ENST00000279247 N4BP3O15049 544 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 STAT3P40763 770 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 GRB10Q13322 594 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 PTPN14Q15678 1187 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 PRR16Q569H4 304 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 E4F1Q66K89 784 aaPredicted RBP20.15■□□□□ 0.82
CAPN1-201ENST00000279247 IGSF22Q8N9C0 903 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 TRIM9Q9C026 710 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 SLC39A2Q9NP94 309 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 EXOC1Q9NV70 894 aa20.15■□□□□ 0.82
CAPN1-201ENST00000279247 MYO1BO43795 1136 aa20.14■□□□□ 0.82
CAPN1-201ENST00000279247 SPDYE2Q495Y8 402 aa20.14■□□□□ 0.82
CAPN1-201ENST00000279247 KRT79Q5XKE5 535 aa20.14■□□□□ 0.82
CAPN1-201ENST00000279247 KCNK18Q7Z418 384 aa20.14■□□□□ 0.82
CAPN1-201ENST00000279247 TRIM47Q96LD4 638 aa20.14■□□□□ 0.82
CAPN1-201ENST00000279247 FBXO28Q9NVF7 368 aa20.14■□□□□ 0.82
CAPN1-201ENST00000279247 ZBTB21Q9ULJ3 1066 aa20.14■□□□□ 0.82
CAPN1-201ENST00000279247 KLRC4O43908 158 aa20.14■□□□□ 0.81
CAPN1-201ENST00000279247 STK4Q13043 487 aa20.14■□□□□ 0.81
CAPN1-201ENST00000279247 HAS1Q92839 578 aa20.14■□□□□ 0.81
CAPN1-201ENST00000279247 MTMR8Q96EF0 704 aa20.14■□□□□ 0.81
CAPN1-201ENST00000279247 TMX1Q9H3N1 280 aa20.14■□□□□ 0.81
CAPN1-201ENST00000279247 ARHGEF10LQ9HCE6 1279 aa20.14■□□□□ 0.81
CAPN1-201ENST00000279247 PRR12Q9ULL5 1215 aa20.14■□□□□ 0.81
CAPN1-201ENST00000279247 PCDHA12Q9UN75 941 aa20.14■□□□□ 0.81
CAPN1-201ENST00000279247 ATRNL1Q5VV63 1379 aa20.14■□□□□ 0.81
CAPN1-201ENST00000279247 CFBP00751 764 aa20.13■□□□□ 0.81
CAPN1-201ENST00000279247 CLK2P49760 499 aaKnown RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms