RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 SHTN1A0MZ66 631 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 CCDC169A6NNP5 214 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 EPB41P11171 864 aaKnown RBP15.89■□□□□ 0.13
TMEM47-201ENST00000275954 FMR1Q06787 632 aaKnown RBP eCLIP15.89■□□□□ 0.13
TMEM47-201ENST00000275954 GADL1Q6ZQY3 521 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 HDXQ7Z353 690 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 LARP4BQ92615 738 aaKnown RBP15.89■□□□□ 0.13
TMEM47-201ENST00000275954 FBXO2Q9UK22 296 aaPredicted RBP15.89■□□□□ 0.13
TMEM47-201ENST00000275954 SAR1BQ9Y6B6 198 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 STK36Q9NRP7 1315 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 HSF2BPO75031 334 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 HARSP12081 509 aaKnown RBP15.89■□□□□ 0.13
TMEM47-201ENST00000275954 NCBP1Q09161 790 aaKnown RBP15.89■□□□□ 0.13
TMEM47-201ENST00000275954 KIAA0753Q2KHM9 967 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 TOGARAM2Q6ZUX3 1019 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 GJA10Q969M2 543 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 IRX2Q9BZI1 471 aaPredicted RBP15.89■□□□□ 0.13
TMEM47-201ENST00000275954 TMEM260Q9NX78 707 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 ARHGEF35A5YM69 484 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 POTEMA6NI47 508 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 ZEB2O60315 1214 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 TTLL1O95922 423 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 CRKP46108 304 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 ZNF658Q5TYW1 1059 aaPredicted RBP15.89■□□□□ 0.13
TMEM47-201ENST00000275954 FAM212AQ96EL1 285 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 FUCA2Q9BTY2 467 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 FHDC1Q9C0D6 1143 aaPredicted RBP15.89■□□□□ 0.13
TMEM47-201ENST00000275954 PANK4Q9NVE7 773 aa15.89■□□□□ 0.13
TMEM47-201ENST00000275954 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.89■□□□□ 0.13
TMEM47-201ENST00000275954 MTF1Q14872 753 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 GALNT17Q6IS24 598 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 TRIM31Q9BZY9 425 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 DISC1Q9NRI5 854 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 SMIM23A6NLE4 172 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 POLR2FP61218 127 aaKnown RBP15.88■□□□□ 0.13
TMEM47-201ENST00000275954 IFI16Q16666 785 aaKnown RBP15.88■□□□□ 0.13
TMEM47-201ENST00000275954 FBXO11Q86XK2 927 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
TMEM47-201ENST00000275954 CNTNAP4Q9C0A0 1308 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 VAV2P52735 878 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 ARHGAP44Q17R89 818 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 FBXO38Q6PIJ6 1188 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 KLHL7Q8IXQ5 586 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 DYDC1Q8WWB3 177 aa15.88■□□□□ 0.13
TMEM47-201ENST00000275954 DISP2A7MBM2 1401 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 POTEJP0CG39 1038 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 OAS2P29728 719 aaKnown RBP15.87■□□□□ 0.13
TMEM47-201ENST00000275954 PRCPP42785 496 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 RNF187Q5TA31 235 aaPredicted RBP15.87■□□□□ 0.13
TMEM47-201ENST00000275954 PPP4R3AQ6IN85 833 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 RTKN2Q8IZC4 609 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 P2RX5Q93086 422 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 CCDC51Q96ER9 411 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 GTPBP4Q9BZE4 634 aaKnown RBP15.87■□□□□ 0.13
TMEM47-201ENST00000275954 FRMD4BQ9Y2L6 1034 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 TLDC2A0PJX2 215 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 EXOC3O60645 756 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 CYP2J2P51589 502 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 ABCB5Q2M3G0 1257 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 SELENOOQ9BVL4 669 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 USP17L15C9J2P7 530 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 USP17L13C9JLJ4 530 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 USP17L11C9JVI0 530 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 USP17L18D6R9N7 530 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 USP17L22D6RA61 530 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 USP17L17D6RBQ6 530 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 USP17L19D6RCP7 530 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 USP17L20D6RJB6 530 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 USP17L24Q0WX57 530 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 SF3B3Q15393 1217 aaKnown RBP15.87■□□□□ 0.13
TMEM47-201ENST00000275954 ASIC2Q16515 512 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 USP17L6PQ6QN14 398 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 COA1Q9GZY4 146 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 ABT1Q9ULW3 272 aaKnown RBP15.87■□□□□ 0.13
TMEM47-201ENST00000275954 NRXN3Q9Y4C0 1643 aa15.87■□□□□ 0.13
TMEM47-201ENST00000275954 GAS7O60861 476 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 ADAM9Q13443 819 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 CC2D2BQ6DHV5 1058 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 ADGRA1Q86SQ6 560 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 HPS3Q969F9 1004 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 NT5C3AQ9H0P0 336 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 CSADQ9Y600 493 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 EFCAB8A8MWE9 144 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 ATP2C2O75185 946 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 ALAS1P13196 640 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 MRPS25P82663 173 aaKnown RBP15.86■□□□□ 0.13
TMEM47-201ENST00000275954 SMC1AQ14683 1233 aaKnown RBP15.86■□□□□ 0.13
TMEM47-201ENST00000275954 SMAP1Q8IYB5 467 aaPredicted RBP15.86■□□□□ 0.13
TMEM47-201ENST00000275954 NOX5Q96PH1 765 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 OSBPL5Q9H0X9 879 aaPredicted RBP15.86■□□□□ 0.13
TMEM47-201ENST00000275954 IFT172Q9UG01 1749 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 TNS2Q63HR2 1409 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 CEP104O60308 925 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 GH2P01242 217 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 HOXA13P31271 388 aaPredicted RBP15.86■□□□□ 0.13
TMEM47-201ENST00000275954 SFMBT2Q5VUG0 894 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 C8orf74Q6P047 294 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 EEPD1Q7L9B9 569 aa15.86■□□□□ 0.13
TMEM47-201ENST00000275954 GPR161Q8N6U8 529 aaKnown RBP15.86■□□□□ 0.13
TMEM47-201ENST00000275954 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms