RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SATB2Q9UPW6 733 aa9.46□□□□□ -0.89
SCUBE3-201ENST00000274938 EIF2AK4Q9P2K8 1649 aaKnown RBP9.46□□□□□ -0.89
SCUBE3-201ENST00000274938 KIF1CO43896 1103 aaKnown RBP9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 CPP00450 1065 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 TRAPPC10P48553 1259 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 RASSF7Q02833 373 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 TMED2Q15363 201 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 NEK8Q86SG6 692 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 TADA2BQ86TJ2 420 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 SPATA5Q8NB90 893 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 DDX39AO00148 427 aaKnown RBP9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 PPARAQ07869 468 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 CHRNA2Q15822 529 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 GLE1Q53GS7 698 aaKnown RBP9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 CNOT6LQ96LI5 555 aaKnown RBP9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 NPC1L1Q9UHC9 1359 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 PRDM1O75626 825 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 GNPTABQ3T906 1256 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 RFX6Q8HWS3 928 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 NFATC2IPQ8NCF5 419 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 OLFM3Q96PB7 478 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 TMEM60Q9H2L4 133 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 ANLNQ9NQW6 1124 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 RIMS2Q9UQ26 1411 aa9.46□□□□□ -0.9
SCUBE3-201ENST00000274938 K7ENM7 598 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 MCF2P10911 925 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 ART3Q13508 389 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 FBXO18Q8NFZ0 1043 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 STOML1Q9UBI4 398 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 PDE6BP35913 854 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 TUBGCP2Q9BSJ2 902 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 TRAIPQ9BWF2 469 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 PARD6BQ9BYG5 372 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 DIS3Q9Y2L1 958 aaKnown RBP9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 PRAG1Q86YV5 1406 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 CASP2P42575 452 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 MYL7Q01449 175 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 LCA5Q86VQ0 697 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 CHURC1Q8WUH1 139 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 SPC25Q9HBM1 224 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 TLK1Q9UKI8 766 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 FAM135BQ49AJ0 1406 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 KDRP35968 1356 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 TADA3O75528 432 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 ACTN1P12814 892 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 ZFXP17010 805 aaPredicted RBP9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 SGO2Q562F6 1265 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 RAPH1Q70E73 1250 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 MCF2L2Q86YR7 1114 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 GPT2Q8TD30 523 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 NT5C1BQ96P26 610 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 MED10Q9BTT4 135 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 ATP8A1Q9Y2Q0 1164 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 ZNF532Q9HCE3 1301 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 UFL1O94874 794 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 CLCN6P51797 869 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 PLTPP55058 493 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 IQCB1Q15051 598 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 CCDC92Q53HC0 331 aaPredicted RBP9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 FAM178BQ8IXR5 827 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 TBC1D22AQ8WUA7 517 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 GGA1Q9UJY5 639 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 IVNS1ABPQ9Y6Y0 642 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 IQANK1A0A1B0GTG1 560 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 SGK1O00141 431 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 CHGBP05060 677 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 PCP11498 1178 aaKnown RBP9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 GAP43P17677 238 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 CASP8Q14790 479 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 RDH13Q8NBN7 331 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 FBXL13Q8NEE6 735 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 DTNBP1Q96EV8 351 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 ZSCAN10Q96SZ4 725 aaPredicted RBP9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 HMGXB3Q12766 1538 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 ZMYM4Q5VZL5 1548 aa9.45□□□□□ -0.9
SCUBE3-201ENST00000274938 PCYT1AP49585 367 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 NR1H3Q13133 447 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 FAM102BQ5T8I3 360 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 PDXDC1Q6P996 788 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 TTLL7Q6ZT98 887 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 KRT26Q7Z3Y9 468 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 PIP4K2CQ8TBX8 421 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 SPTLC3Q9NUV7 552 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 BIN2Q9UBW5 565 aaPredicted RBP9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 CCPG1Q9ULG6 757 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 ARHGAP10A1A4S6 786 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 RIMBP2O15034 1052 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 TFAP4Q01664 338 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 ITKQ08881 620 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 DDB1Q16531 1140 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 ARMCX5Q6P1M9 558 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 ZNF710Q8N1W2 664 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 PPM1KQ8N3J5 372 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 AK8Q96MA6 479 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 SPDYE16A6NNV3 312 aaPredicted RBP9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 ZBTB24O43167 697 aaPredicted RBP9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 CFBP00751 764 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 ABCD1P33897 745 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 MAN2A1Q16706 1144 aa9.44□□□□□ -0.9
SCUBE3-201ENST00000274938 SPDYE2Q495Y8 402 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms