RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 EBF2Q9HAK2 575 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 TMBIM4Q9HC24 238 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 BAIAP2L1Q9UHR4 511 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 PDS5AQ29RF7 1337 aaKnown RBP10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 NHSL1Q5SYE7 1610 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 PKD1L3Q7Z443 1732 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 SCN11AQ9UI33 1791 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 hCG_1642624A0A1W2PR95 340 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 F8W031 263 aaPredicted RBP10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 H7C1W4 665 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 ADAMTS2O95450 1211 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 CYLC1P35663 651 aaPredicted RBP10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 SAFBQ15424 915 aaKnown RBP eCLIP10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 UAP1Q16222 522 aaPredicted RBP10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 GLE1Q53GS7 698 aaKnown RBP10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 MAATS1Q7Z4T9 603 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 SGMS1Q86VZ5 419 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 CCDC50Q8IVM0 306 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 MREGQ8N565 214 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 RAPGEF5Q92565 580 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 ARFGEF2Q9Y6D5 1785 aa10.18□□□□□ -0.78
HMGCLL1-201ENST00000274901 A0A1W2PQC6 194 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 HMGB1P1B2RPK0 211 aaPredicted RBP10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 H0YGN5 161 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 SLC8A1P32418 973 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 DNA2P51530 1060 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 TCIRG1Q13488 830 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 CDC37Q16543 378 aaPredicted RBP10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 IL17AQ16552 155 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 HIBCHQ6NVY1 386 aaPredicted RBP10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 TICAM2Q86XR7 235 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 CUL5Q93034 780 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 ZKSCAN3Q9BRR0 538 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 GPR108Q9NPR9 543 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 RBM28Q9NW13 759 aaKnown RBP10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 HYOU1Q9Y4L1 999 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 NFS1Q9Y697 457 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 ABCA3Q99758 1704 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 PCDH11XQ9BZA7 1347 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 PCDH11YQ9BZA8 1340 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 C5orf60A6NFR6 353 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 TRIM75PA6NK02 468 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 EYA2O00167 538 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 EPHB6O15197 1021 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 PPIP5K2O43314 1243 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 BUB1BO60566 1050 aaPredicted RBP10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 DNAJC8O75937 253 aaPredicted RBP10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 SEMA3FQ13275 785 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 ZNF174Q15697 407 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 HLFQ16534 295 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 CCDC181Q5TID7 509 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 TMC4Q7Z404 712 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 IFT20Q8IY31 132 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 PROCA1Q8NCQ7 364 aaPredicted RBP10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 SPDYE1Q8NFV5 336 aaPredicted RBP10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 TRIM58Q8NG06 486 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 CCDC26Q8TAB7 109 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 BORCS6Q96GS4 357 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 ETAA1Q9NY74 926 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 ZSWIM5Q9P217 1185 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 TRPC6Q9Y210 931 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 C15orf41Q9Y2V0 281 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 PCDHA13Q9Y5I0 950 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 SLC12A7Q9Y666 1083 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 ROBO1Q9Y6N7 1651 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 MYH7P12883 1935 aa10.17□□□□□ -0.78
HMGCLL1-201ENST00000274901 ADAMTS7Q9UKP4 1686 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 EIF4E1BA6NMX2 242 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 SRRM3A6NNA2 597 aaPredicted RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 NUTM2BA6NNL0 878 aaPredicted RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 NUTM2EB1AL46 878 aaPredicted RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 PRDM1O75626 825 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 ANP32DO95626 131 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 SRGNP10124 158 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 PRLRP16471 622 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 CALRP27797 417 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 ECHS1P30084 290 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 IL15P40933 162 aaPredicted RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 TSR1Q2NL82 804 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 ZNF658Q5TYW1 1059 aaPredicted RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 TYW1BQ6NUM6 668 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 HOOK2Q96ED9 719 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 MTMR8Q96EF0 704 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 IFIH1Q9BYX4 1025 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 ARHGAP20Q9P2F6 1191 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 TACC1O75410 805 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 SMNDC1O75940 238 aaKnown RBP eCLIP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 SNRPA1P09661 255 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 TRIM21P19474 475 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 DRD4P21917 467 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 RNASE9P60153 205 aaKnown RBP10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 ZNF844Q08AG5 666 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 PAK2Q13177 524 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 PPP1R7Q15435 360 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 THEMIS2Q5TEJ8 643 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 KLHDC7AQ5VTJ3 777 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 MIS18BP1Q6P0N0 1132 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 CCDC170Q8IYT3 715 aa10.16□□□□□ -0.78
HMGCLL1-201ENST00000274901 CRACR2BQ8N4Y2 399 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms