RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 GCFC2P16383 781 aaKnown RBP16.47■□□□□ 0.23
TRIM23-202ENST00000274327 MDM2Q00987 491 aaPredicted RBP16.47■□□□□ 0.23
TRIM23-202ENST00000274327 CCDC173Q0VFZ6 552 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 PRKG1Q13976 671 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 LDHDQ86WU2 507 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 CDCA5Q96FF9 252 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 TUBE1Q9UJT0 475 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 MRPL11Q9Y3B7 192 aaKnown RBP16.47■□□□□ 0.23
TRIM23-202ENST00000274327 SLC37A4O43826 429 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 PPP1R12BO60237 982 aaPredicted RBP16.47■□□□□ 0.23
TRIM23-202ENST00000274327 ICAM1P05362 532 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 USP11P51784 963 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 VGLL4Q14135 290 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 STX1AQ16623 288 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 ANO6Q4KMQ2 910 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 MOXD1Q6UVY6 613 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 ERCC4Q92889 916 aaPredicted RBP16.47■□□□□ 0.23
TRIM23-202ENST00000274327 TRIM44Q96DX7 344 aaPredicted RBP16.47■□□□□ 0.23
TRIM23-202ENST00000274327 MBOAT7Q96N66 472 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 SLC38A10Q9HBR0 1119 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.47■□□□□ 0.23
TRIM23-202ENST00000274327 USP25Q9UHP3 1055 aa16.47■□□□□ 0.23
TRIM23-202ENST00000274327 CYP3A7-CYP3A51PA0A087WV96 503 aa16.46■□□□□ 0.23
TRIM23-202ENST00000274327 FDX1P10109 184 aa16.46■□□□□ 0.23
TRIM23-202ENST00000274327 CYP3A7P24462 503 aa16.46■□□□□ 0.23
TRIM23-202ENST00000274327 SH3D19Q5HYK7 790 aa16.46■□□□□ 0.23
TRIM23-202ENST00000274327 KANK3Q6NY19 840 aa16.46■□□□□ 0.23
TRIM23-202ENST00000274327 FAM200AQ8TCP9 573 aa16.46■□□□□ 0.23
TRIM23-202ENST00000274327 ANP32BQ92688 251 aaKnown RBP16.46■□□□□ 0.23
TRIM23-202ENST00000274327 PYM1Q9BRP8 204 aaKnown RBP16.46■□□□□ 0.23
TRIM23-202ENST00000274327 TANGO6Q9C0B7 1094 aa16.46■□□□□ 0.23
TRIM23-202ENST00000274327 ESPNB1AK53 854 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 FLOT1O75955 427 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 CAVIN2O95810 425 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 SREBF1P36956 1147 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 IREB2P48200 963 aaKnown RBP16.45■□□□□ 0.22
TRIM23-202ENST00000274327 HMGCS2P54868 508 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 E2F4Q16254 413 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 CALCRLQ16602 461 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 SH3RF1Q7Z6J0 888 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 PDILTQ8N807 584 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 AK8Q96MA6 479 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 PPP1R9BQ96SB3 815 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 CCSER1Q9C0I3 900 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 RBBP6Q7Z6E9 1792 aaKnown RBP16.45■□□□□ 0.22
TRIM23-202ENST00000274327 COL11A1P12107 1806 aaPredicted RBP16.45■□□□□ 0.22
TRIM23-202ENST00000274327 SPDYE3A6NKU9 549 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 SLFN14P0C7P3 912 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 PNOCQ13519 176 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 HS1BP3Q53T59 392 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
TRIM23-202ENST00000274327 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
TRIM23-202ENST00000274327 DHX58Q96C10 678 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 AGBL1Q96MI9 1066 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 ANO10Q9NW15 660 aa16.45■□□□□ 0.22
TRIM23-202ENST00000274327 HOOK1Q9UJC3 728 aaKnown RBP16.45■□□□□ 0.22
TRIM23-202ENST00000274327 LOC285556D6RIA3 1793 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.44■□□□□ 0.22
TRIM23-202ENST00000274327 GCOM1H8Y6P7 765 aaPredicted RBP16.44■□□□□ 0.22
TRIM23-202ENST00000274327 FOXN1O15353 648 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 POLR2MP0CAP2 368 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 NF2P35240 595 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 FXR2P51116 673 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRIM23-202ENST00000274327 ARHGAP4P98171 946 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 GHRHRQ02643 423 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 IGSF22Q8N9C0 903 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 TBC1D5Q92609 795 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 DNAJC25Q9H1X3 360 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 DDX25Q9UHL0 483 aaKnown RBP16.44■□□□□ 0.22
TRIM23-202ENST00000274327 PNMA2Q9UL42 364 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 CCPG1Q9ULG6 757 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 CSADQ9Y600 493 aa16.44■□□□□ 0.22
TRIM23-202ENST00000274327 CYP3A4P08684 503 aa16.43■□□□□ 0.22
TRIM23-202ENST00000274327 HOXA13P31271 388 aaPredicted RBP16.43■□□□□ 0.22
TRIM23-202ENST00000274327 CIITAP33076 1130 aa16.43■□□□□ 0.22
TRIM23-202ENST00000274327 TXLNAP40222 546 aa16.43■□□□□ 0.22
TRIM23-202ENST00000274327 NLRP12P59046 1061 aa16.43■□□□□ 0.22
TRIM23-202ENST00000274327 POSTNQ15063 836 aa16.43■□□□□ 0.22
TRIM23-202ENST00000274327 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
TRIM23-202ENST00000274327 C11orf57Q6ZUT1 292 aaPredicted RBP16.43■□□□□ 0.22
TRIM23-202ENST00000274327 IQUBQ8NA54 791 aa16.43■□□□□ 0.22
TRIM23-202ENST00000274327 RBM46Q8TBY0 533 aaKnown RBP16.43■□□□□ 0.22
TRIM23-202ENST00000274327 CBX8Q9HC52 389 aa16.43■□□□□ 0.22
TRIM23-202ENST00000274327 TMOD4Q9NZQ9 345 aa16.43■□□□□ 0.22
TRIM23-202ENST00000274327 ADAMTS5Q9UNA0 930 aa16.43■□□□□ 0.22
TRIM23-202ENST00000274327 ZBED4O75132 1171 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 CFBP00751 764 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 DSG3P32926 999 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 NT5DC1Q5TFE4 455 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 PDXDC2PQ6P474 469 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 CATSPERGQ6ZRH7 1159 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 REPS2Q8NFH8 660 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 CLEC4DQ8WXI8 215 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 HAS1Q92839 578 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 PCDHA5Q9Y5H7 936 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 SRCAPQ6ZRS2 3230 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 A0A087WWV3 80 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 PP2D1A8MPX8 630 aa16.42■□□□□ 0.22
TRIM23-202ENST00000274327 VWA5AO00534 786 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms