RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PTPRCP08575 1304 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 CLRN2A0PK11 232 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 LINC01387J3KSC0 135 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
LRTM1-201ENST00000273286 RABL6Q3YEC7 729 aaPredicted RBP12.11□□□□□ -0.47
LRTM1-201ENST00000273286 EPHA10Q5JZY3 1008 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 INTS3Q68E01 1043 aaKnown RBP12.11□□□□□ -0.47
LRTM1-201ENST00000273286 HOOK2Q96ED9 719 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 ERO1AQ96HE7 468 aa12.11□□□□□ -0.47
LRTM1-201ENST00000273286 TTF2Q9UNY4 1162 aaKnown RBP12.11□□□□□ -0.47
LRTM1-201ENST00000273286 SSC5DA1L4H1 1573 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 ARAP2Q8WZ64 1704 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 F8W735 103 aaPredicted RBP12.1□□□□□ -0.47
LRTM1-201ENST00000273286 PCSK2P16519 638 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 CDC27P30260 824 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 MTMR3Q13615 1198 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 ARHGEF6Q15052 776 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 NBPF12Q5TAG4 269 aaPredicted RBP12.1□□□□□ -0.47
LRTM1-201ENST00000273286 FAM84BQ96KN1 310 aaPredicted RBP12.1□□□□□ -0.47
LRTM1-201ENST00000273286 PBX4Q9BYU1 374 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 CNTN3Q9P232 1028 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 SUGT1Q9Y2Z0 365 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 MAST3O60307 1309 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 KIF16BQ96L93 1317 aa12.1□□□□□ -0.47
LRTM1-201ENST00000273286 FRAT2O75474 233 aaPredicted RBP12.09□□□□□ -0.47
LRTM1-201ENST00000273286 USP2O75604 605 aaPredicted RBP12.09□□□□□ -0.47
LRTM1-201ENST00000273286 WDHD1O75717 1129 aaPredicted RBP12.09□□□□□ -0.47
LRTM1-201ENST00000273286 PDGFAP04085 211 aa12.09□□□□□ -0.47
LRTM1-201ENST00000273286 CDC25BP30305 580 aa12.09□□□□□ -0.47
LRTM1-201ENST00000273286 GYG1P46976 350 aa12.09□□□□□ -0.47
LRTM1-201ENST00000273286 EIF1AXP47813 144 aaKnown RBP12.09□□□□□ -0.47
LRTM1-201ENST00000273286 DZIP1LQ8IYY4 767 aaKnown RBP12.09□□□□□ -0.47
LRTM1-201ENST00000273286 FAM9BQ8IZU0 186 aa12.09□□□□□ -0.47
LRTM1-201ENST00000273286 TMEM130Q8N3G9 435 aa12.09□□□□□ -0.47
LRTM1-201ENST00000273286 GALNT11Q8NCW6 608 aa12.09□□□□□ -0.47
LRTM1-201ENST00000273286 SUCLG2Q96I99 432 aa12.09□□□□□ -0.47
LRTM1-201ENST00000273286 CLMNQ96JQ2 1002 aa12.09□□□□□ -0.47
LRTM1-201ENST00000273286 MRIQ9BWK5 157 aa12.09□□□□□ -0.47
LRTM1-201ENST00000273286 ZNF70Q9UC06 446 aaPredicted RBP12.09□□□□□ -0.47
LRTM1-201ENST00000273286 RIPOR2Q9Y4F9 1068 aa12.09□□□□□ -0.47
LRTM1-201ENST00000273286 TNRC18O15417 2968 aaPredicted RBP12.08□□□□□ -0.48
LRTM1-201ENST00000273286 A6NHS1 94 aa12.08□□□□□ -0.48
LRTM1-201ENST00000273286 IGF2BP3O00425 579 aaKnown RBP eCLIP12.08□□□□□ -0.48
LRTM1-201ENST00000273286 PDE8BO95263 885 aa12.08□□□□□ -0.48
LRTM1-201ENST00000273286 NBPF7P0C2Y1 421 aaPredicted RBP12.08□□□□□ -0.48
LRTM1-201ENST00000273286 C8orf34Q49A92 452 aa12.08□□□□□ -0.48
LRTM1-201ENST00000273286 ADAMTSL4Q6UY14 1074 aa12.08□□□□□ -0.48
LRTM1-201ENST00000273286 AGGF1Q8N302 714 aaeCLIP12.08□□□□□ -0.48
LRTM1-201ENST00000273286 CEP120Q8N960 986 aa12.08□□□□□ -0.48
LRTM1-201ENST00000273286 BICC1Q9H694 974 aaKnown RBP12.08□□□□□ -0.48
LRTM1-201ENST00000273286 TMOD2Q9NZR1 351 aa12.08□□□□□ -0.48
LRTM1-201ENST00000273286 TRIM17Q9Y577 477 aa12.08□□□□□ -0.48
LRTM1-201ENST00000273286 ZNF521Q96K83 1311 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 CRKP46108 304 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 METTL24Q5JXM2 366 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 FKBP1CQ5VVH2 108 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 OTOP1Q7RTM1 612 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 FBXO33Q7Z6M2 555 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 TTC16Q8NEE8 873 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 TEKT1Q969V4 418 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 KAZALD1Q96I82 304 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 TDRD3Q9H7E2 651 aaKnown RBP12.07□□□□□ -0.48
LRTM1-201ENST00000273286 FZD1Q9UP38 647 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 JAG2Q9Y219 1238 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 CSADQ9Y600 493 aa12.07□□□□□ -0.48
LRTM1-201ENST00000273286 E9PSI1 815 aa12.06□□□□□ -0.48
LRTM1-201ENST00000273286 IFIT1P09914 478 aaKnown RBP12.06□□□□□ -0.48
LRTM1-201ENST00000273286 MZF1P28698 734 aaPredicted RBP12.06□□□□□ -0.48
LRTM1-201ENST00000273286 GTF2A2P52657 109 aa12.06□□□□□ -0.48
LRTM1-201ENST00000273286 SP3Q02447 781 aa12.06□□□□□ -0.48
LRTM1-201ENST00000273286 PUM3Q15397 648 aaKnown RBP12.06□□□□□ -0.48
LRTM1-201ENST00000273286 FAM83AQ86UY5 434 aa12.06□□□□□ -0.48
LRTM1-201ENST00000273286 OPTNQ96CV9 577 aa12.06□□□□□ -0.48
LRTM1-201ENST00000273286 PUS3Q9BZE2 481 aaKnown RBP12.06□□□□□ -0.48
LRTM1-201ENST00000273286 ZCCHC17Q9NP64 241 aaKnown RBP12.06□□□□□ -0.48
LRTM1-201ENST00000273286 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.06□□□□□ -0.48
LRTM1-201ENST00000273286 PTPRAP18433 802 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 EPHA1P21709 976 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 CES1P23141 567 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 CRHR2Q13324 411 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 XKR5Q6UX68 686 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.05□□□□□ -0.48
LRTM1-201ENST00000273286 C1orf127Q8N9H9 656 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.05□□□□□ -0.48
LRTM1-201ENST00000273286 GCC1Q96CN9 775 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 ZDHHC15Q96MV8 337 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 TEPSINQ96N21 525 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 R3HDMLQ9H3Y0 253 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 SH2B1Q9NRF2 756 aaPredicted RBP12.05□□□□□ -0.48
LRTM1-201ENST00000273286 HDAC5Q9UQL6 1122 aa12.05□□□□□ -0.48
LRTM1-201ENST00000273286 RPAP1Q9BWH6 1393 aaPredicted RBP12.05□□□□□ -0.48
LRTM1-201ENST00000273286 CARNS1A5YM72 827 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 TCP10L2B9ZVM9 353 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 ACPPP15309 386 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 ALDH1L2Q3SY69 923 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 ALKBH2Q6NS38 261 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 FAM117BQ6P1L5 589 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 HHIPL2Q6UWX4 724 aa12.04□□□□□ -0.48
LRTM1-201ENST00000273286 PRR23CQ6ZRP0 262 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms