RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 RRAGBQ5VZM2 374 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 DZIP1Q86YF9 867 aaKnown RBP11.33□□□□□ -0.6
CPNE9-201ENST00000273027 ZNF444Q8N0Y2 327 aaPredicted RBP11.33□□□□□ -0.6
CPNE9-201ENST00000273027 TXLNBQ8N3L3 684 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 KIFC2Q96AC6 838 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 CARD6Q9BX69 1037 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 SPZ1Q9BXG8 430 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 RTFDC1Q9BY42 306 aaPredicted RBP11.33□□□□□ -0.6
CPNE9-201ENST00000273027 HAUS4Q9H6D7 363 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 DISC1Q9NRI5 854 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 ZBTB12Q9Y330 459 aaPredicted RBP11.33□□□□□ -0.6
CPNE9-201ENST00000273027 ABCB11O95342 1321 aa11.33□□□□□ -0.6
CPNE9-201ENST00000273027 LRRC37AA6NMS7 1700 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 CTAGE9A4FU28 777 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 M0R2N6 131 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 SNAP23O00161 211 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 PSMA7O14818 248 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 BBOX1O75936 387 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 LDHBP07195 334 aaKnown RBP11.32□□□□□ -0.6
CPNE9-201ENST00000273027 PNMA6AP0CW24 399 aaPredicted RBP11.32□□□□□ -0.6
CPNE9-201ENST00000273027 ATP2B1P20020 1258 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 STAT6P42226 847 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 COPB1P53618 953 aaKnown RBP11.32□□□□□ -0.6
CPNE9-201ENST00000273027 ADKP55263 362 aaKnown RBP11.32□□□□□ -0.6
CPNE9-201ENST00000273027 KRT83P78385 493 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 RBL2Q08999 1139 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 TCP11X2Q5H9J9 407 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 FIGNQ5HY92 759 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 RCSD1Q6JBY9 416 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 PIK3AP1Q6ZUJ8 805 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 ZNF804AQ7Z570 1209 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 SP8Q8IXZ3 490 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 C4orf32Q8N8J7 132 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 DCPSQ96C86 337 aaKnown RBP11.32□□□□□ -0.6
CPNE9-201ENST00000273027 MED15Q96RN5 788 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 ACBD3Q9H3P7 528 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 BARHL2Q9NY43 387 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 MAGEC2Q9UBF1 373 aaPredicted RBP11.32□□□□□ -0.6
CPNE9-201ENST00000273027 HDAC9Q9UKV0 1011 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 XDHP47989 1333 aa11.32□□□□□ -0.6
CPNE9-201ENST00000273027 A0A087X0B3 334 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 YDJCA8MPS7 323 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 KCNJ18B7U540 433 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 ADM5C9JUS6 153 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 UBE2Q2LH0YL09 131 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 UBA7P41226 1012 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 USP5P45974 858 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 KCNJ12Q14500 433 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 NAA30Q147X3 362 aaPredicted RBP11.31□□□□□ -0.6
CPNE9-201ENST00000273027 KRT31Q15323 416 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 USP49Q70CQ1 688 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 ZNF771Q7L3S4 317 aaPredicted RBP11.31□□□□□ -0.6
CPNE9-201ENST00000273027 TMC4Q7Z404 712 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 TRMT44Q8IYL2 757 aaKnown RBP11.31□□□□□ -0.6
CPNE9-201ENST00000273027 CCDC170Q8IYT3 715 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 ADSSL1Q8N142 457 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 CMTR1Q8N1G2 835 aaKnown RBP11.31□□□□□ -0.6
CPNE9-201ENST00000273027 MSANTD4Q8NCY6 345 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 OR8K1Q8NGG5 319 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 NELFBQ8WX92 580 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 RUBCNQ92622 972 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
CPNE9-201ENST00000273027 NAP1L4Q99733 375 aaKnown RBP11.31□□□□□ -0.6
CPNE9-201ENST00000273027 ZMYND12Q9H0C1 365 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 MKNK2Q9HBH9 465 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 ABHD10Q9NUJ1 306 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 KBTBD4Q9NVX7 518 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 MCM9Q9NXL9 1143 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 FHOD1Q9Y613 1164 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 IRS2Q9Y4H2 1338 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 MYH8P13535 1937 aa11.31□□□□□ -0.6
CPNE9-201ENST00000273027 POLR2AP24928 1970 aaKnown RBP11.3□□□□□ -0.6
CPNE9-201ENST00000273027 TAF1P21675 1872 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 PALM3A6NDB9 673 aaPredicted RBP11.3□□□□□ -0.6
CPNE9-201ENST00000273027 EIF3JO75822 258 aaKnown RBP11.3□□□□□ -0.6
CPNE9-201ENST00000273027 EGFRP00533 1210 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 TSPY3P0CV98 308 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 TSPY8P0CW00 308 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
CPNE9-201ENST00000273027 MCM7P33993 719 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 CYLC1P35663 651 aaPredicted RBP11.3□□□□□ -0.6
CPNE9-201ENST00000273027 CDK17Q00537 523 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 TFAP4Q01664 338 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 PKN2Q16513 984 aaKnown RBP11.3□□□□□ -0.6
CPNE9-201ENST00000273027 KLHL10Q6JEL2 608 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 ZNF384Q8TF68 577 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 TBC1D22AQ8WUA7 517 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 CELF1Q92879 486 aaKnown RBP11.3□□□□□ -0.6
CPNE9-201ENST00000273027 SHISA4Q96DD7 197 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 NUP88Q99567 741 aaPredicted RBP11.3□□□□□ -0.6
CPNE9-201ENST00000273027 NAPGQ99747 312 aaPredicted RBP11.3□□□□□ -0.6
CPNE9-201ENST00000273027 RAB34Q9BZG1 259 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 STK17AQ9UEE5 414 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 RAB21Q9UL25 225 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 CAPN11Q9UMQ6 739 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 CTNND2Q9UQB3 1225 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 SUGT1Q9Y2Z0 365 aa11.3□□□□□ -0.6
CPNE9-201ENST00000273027 LUC7L2Q9Y383 392 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms