RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 RCCD1A6NED2 376 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 RASSF10A6NK89 507 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 CCDC122Q5T0U0 273 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 KCNK18Q7Z418 384 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 P2RX5Q93086 422 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 CCDC51Q96ER9 411 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 LACRTQ9GZZ8 138 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 FAM207AQ9NSI2 230 aaPredicted RBP12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 LRWD1Q9UFC0 647 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 LAMB1P07942 1786 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 SSBP05455 408 aaKnown RBP eCLIP12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 ST5P78524 1137 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 KCNB1Q14721 858 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 CALCRLQ16602 461 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 LONRF2Q1L5Z9 754 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 TSR1Q2NL82 804 aaKnown RBP12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 CCDC155Q8N6L0 562 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 KANSL2Q9H9L4 492 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 TBC1D7Q9P0N9 293 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 PCDHAC2Q9Y5I4 1007 aa12.12□□□□□ -0.47
PRUNE1-201ENST00000271620 BTAF1O14981 1849 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 MYMKA6NI61 221 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 OAS2P29728 719 aaKnown RBP12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 HERVK_113P62684 666 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 DDR1Q08345 913 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 SMC1AQ14683 1233 aaKnown RBP12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 TMED8Q6PL24 325 aaPredicted RBP12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 GDAP1L1Q96MZ0 367 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 SEMA6BQ9H3T3 888 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 KCNQ5Q9NR82 932 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 MTMR4Q9NYA4 1195 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 EPHB6O15197 1021 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 EDIL3O43854 480 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 ZMYND10O75800 440 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 ATP1A1P05023 1023 aaKnown RBP12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 IL1R1P14778 569 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 TCP10Q12799 353 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 GALNT17Q6IS24 598 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 KIAA1328Q86T90 577 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 CERS5Q8N5B7 392 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 SMCR8Q8TEV9 937 aaPredicted RBP12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 CALML4Q96GE6 196 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 CDK5RAP3Q96JB5 506 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 DRC1Q96MC2 740 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 FUT8Q9BYC5 575 aa12.11□□□□□ -0.47
PRUNE1-201ENST00000271620 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 VSNL1P62760 191 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 GRB10Q13322 594 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 ECM1Q16610 540 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 FNBP4Q8N3X1 1017 aaPredicted RBP12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 RBM17Q96I25 401 aaKnown RBP12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 PSMB7Q99436 277 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 THAP9Q9H5L6 903 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 BLOC1S4Q9NUP1 217 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 LAD1O00515 517 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 ZNF185O15231 689 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 PPP1R11O60927 126 aaPredicted RBP12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 KIF20AO95235 890 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 CCNE1P24864 410 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 PRPHP41219 470 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 SNAP25P60880 206 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 NFIAQ12857 509 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 CRY2Q49AN0 593 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 MEX3CQ5U5Q3 659 aaKnown RBP12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 LZTS2Q9BRK4 669 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 NHEJ1Q9H9Q4 299 aaPredicted RBP12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 ZNF219Q9P2Y4 722 aaPredicted RBP12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 MYO6Q9UM54 1294 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 CAPN11Q9UMQ6 739 aa12.1□□□□□ -0.47
PRUNE1-201ENST00000271620 CTAGE15A4D2H0 777 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 MARCH6O60337 910 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 CTAGE8P0CG41 777 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 FECHP22830 423 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 DNM2P50570 870 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 TRIM14Q14142 442 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 MIIPQ5JXC2 388 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 SV2BQ7L1I2 683 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 CTAGE6Q86UF2 777 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 CTAGE4Q8IX94 777 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 ADGRF4Q8IZF3 695 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 SNX29Q8TEQ0 813 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 DNAJC7Q99615 494 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 ABCB6Q9NP58 842 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 USP17L15C9J2P7 530 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 USP17L10C9JJH3 530 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 USP17L13C9JLJ4 530 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 USP17L11C9JVI0 530 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 USP17L18D6R9N7 530 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 USP17L22D6RA61 530 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 USP17L17D6RBQ6 530 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 USP17L19D6RCP7 530 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 USP17L20D6RJB6 530 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 N4BP1O75113 896 aaKnown RBP12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 PHACTR2O75167 634 aa12.09□□□□□ -0.47
PRUNE1-201ENST00000271620 SRGNP10124 158 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms