RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 WDR19Q8NEZ3 1342 aa20.53■□□□□ 0.88
CSNK1D-201ENST00000269361 DLL1O00548 723 aa20.52■□□□□ 0.88
CSNK1D-201ENST00000269361 CD4P01730 458 aa20.52■□□□□ 0.88
CSNK1D-201ENST00000269361 ITGA7Q13683 1181 aa20.52■□□□□ 0.88
CSNK1D-201ENST00000269361 DUSP28Q4G0W2 176 aa20.52■□□□□ 0.88
CSNK1D-201ENST00000269361 ANKS1AQ92625 1134 aa20.52■□□□□ 0.88
CSNK1D-201ENST00000269361 CDX2Q99626 313 aaPredicted RBP20.52■□□□□ 0.88
CSNK1D-201ENST00000269361 CTNNA3Q9UI47 895 aa20.52■□□□□ 0.88
CSNK1D-201ENST00000269361 GRIN2DO15399 1336 aa20.52■□□□□ 0.87
CSNK1D-201ENST00000269361 PPIGQ13427 754 aaKnown RBP eCLIP20.51■□□□□ 0.876e-8■■□□□ 11.5
CSNK1D-201ENST00000269361 IMMTQ16891 758 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-201ENST00000269361 C16orf59Q7L2K0 433 aa20.51■□□□□ 0.87
CSNK1D-201ENST00000269361 TMEM199Q8N511 208 aa20.51■□□□□ 0.87
CSNK1D-201ENST00000269361 PNMA1Q8ND90 353 aa20.51■□□□□ 0.87
CSNK1D-201ENST00000269361 ZSCAN10Q96SZ4 725 aaPredicted RBP20.51■□□□□ 0.87
CSNK1D-201ENST00000269361 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.51■□□□□ 0.875e-8■■□□□ 13.5
CSNK1D-201ENST00000269361 SEZ6LQ9BYH1 1024 aa20.51■□□□□ 0.87
CSNK1D-201ENST00000269361 WDR11Q9BZH6 1224 aa20.51■□□□□ 0.87
CSNK1D-201ENST00000269361 PPP1R12CQ9BZL4 782 aa20.51■□□□□ 0.87
CSNK1D-201ENST00000269361 UBA5Q9GZZ9 404 aa20.51■□□□□ 0.87
CSNK1D-201ENST00000269361 TTYH1Q9H313 450 aaPredicted RBP20.51■□□□□ 0.87
CSNK1D-201ENST00000269361 RBM47A0AV96 593 aaKnown RBP20.5■□□□□ 0.87
CSNK1D-201ENST00000269361 B4E1Z4 1266 aa20.5■□□□□ 0.87
CSNK1D-201ENST00000269361 CSF2RAP15509 400 aa20.5■□□□□ 0.87
CSNK1D-201ENST00000269361 RPS6P62753 249 aaKnown RBP20.5■□□□□ 0.87
CSNK1D-201ENST00000269361 CPVLQ9H3G5 476 aa20.5■□□□□ 0.87
CSNK1D-201ENST00000269361 KAT14Q9H8E8 782 aa20.5■□□□□ 0.87
CSNK1D-201ENST00000269361 ZSWIM5Q9P217 1185 aa20.5■□□□□ 0.87
CSNK1D-201ENST00000269361 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.49■□□□□ 0.87
CSNK1D-201ENST00000269361 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.49■□□□□ 0.87
CSNK1D-201ENST00000269361 PSMC6P62333 389 aa20.49■□□□□ 0.87
CSNK1D-201ENST00000269361 PDE4DQ08499 809 aa20.49■□□□□ 0.87
CSNK1D-201ENST00000269361 ENAHQ8N8S7 591 aaPredicted RBP20.49■□□□□ 0.87
CSNK1D-201ENST00000269361 RGS22Q8NE09 1264 aa20.49■□□□□ 0.87
CSNK1D-201ENST00000269361 DNERQ8NFT8 737 aa20.49■□□□□ 0.87
CSNK1D-201ENST00000269361 MPHOSPH6Q99547 160 aaKnown RBP20.49■□□□□ 0.87
CSNK1D-201ENST00000269361 MCM3APO60318 1980 aa20.48■□□□□ 0.87
CSNK1D-201ENST00000269361 EDNRBP24530 442 aa20.48■□□□□ 0.87
CSNK1D-201ENST00000269361 CYP2C18P33260 490 aa20.48■□□□□ 0.87
CSNK1D-201ENST00000269361 USH1GQ495M9 461 aa20.48■□□□□ 0.87
CSNK1D-201ENST00000269361 TMEM240Q5SV17 173 aa20.48■□□□□ 0.87
CSNK1D-201ENST00000269361 KRT23Q9C075 422 aa20.48■□□□□ 0.87
CSNK1D-201ENST00000269361 TRPV6Q9H1D0 765 aa20.48■□□□□ 0.87
CSNK1D-201ENST00000269361 SUPT16HQ9Y5B9 1047 aaKnown RBP20.48■□□□□ 0.87
CSNK1D-201ENST00000269361 TMEM265A0A087WTH1 108 aa20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 B4DLN1 442 aa20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 ACRP10323 421 aa20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 PDE4AP27815 886 aa20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 MRPL12P52815 198 aaKnown RBP20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 CDC37Q16543 378 aaPredicted RBP20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 ASPRV1Q53RT3 343 aa20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 ADGRF4Q8IZF3 695 aa20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 HIPK3Q9H422 1215 aa20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 CNNM2Q9H8M5 875 aa20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 POLR3EQ9NVU0 708 aa20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 TNKSO95271 1327 aa20.47■□□□□ 0.87
CSNK1D-201ENST00000269361 B4GALT4O60513 344 aa20.46■□□□□ 0.87
CSNK1D-201ENST00000269361 CPT1AP50416 773 aa20.46■□□□□ 0.87
CSNK1D-201ENST00000269361 RASIP1Q5U651 963 aa20.46■□□□□ 0.87
CSNK1D-201ENST00000269361 PSRC1Q6PGN9 363 aaPredicted RBP20.46■□□□□ 0.87
CSNK1D-201ENST00000269361 ZNF365Q70YC5 407 aa20.46■□□□□ 0.87
CSNK1D-201ENST00000269361 OR6J1Q8NGC5 347 aa20.46■□□□□ 0.87
CSNK1D-201ENST00000269361 UBAC1Q9BSL1 405 aa20.46■□□□□ 0.87
CSNK1D-201ENST00000269361 MAF1Q9H063 256 aa20.46■□□□□ 0.87
CSNK1D-201ENST00000269361 IL25Q9H293 177 aa20.46■□□□□ 0.87
CSNK1D-201ENST00000269361 IL23AQ9NPF7 189 aa20.46■□□□□ 0.87
CSNK1D-201ENST00000269361 LRRC37A2A6NM11 1700 aa20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 PARP1P09874 1014 aaKnown RBP20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 DNAJB2P25686 324 aa20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 PURAQ00577 322 aaKnown RBP20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 PPP2R5BQ15173 497 aa20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 SCFD2Q8WU76 684 aa20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 MYLIPQ8WY64 445 aa20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 TBC1D5Q92609 795 aa20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 NOC4LQ9BVI4 516 aaKnown RBP20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 ALDH8A1Q9H2A2 487 aaPredicted RBP20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 ABCB11O95342 1321 aa20.45■□□□□ 0.86
CSNK1D-201ENST00000269361 NKRFO15226 690 aaKnown RBP eCLIP20.44■□□□□ 0.86
CSNK1D-201ENST00000269361 MYL3P08590 195 aa20.44■□□□□ 0.86
CSNK1D-201ENST00000269361 GSPT1P15170 499 aaKnown RBP20.44■□□□□ 0.86
CSNK1D-201ENST00000269361 TTC22Q5TAA0 569 aa20.44■□□□□ 0.86
CSNK1D-201ENST00000269361 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.44■□□□□ 0.86
CSNK1D-201ENST00000269361 MTG1Q9BT17 334 aaPredicted RBP20.44■□□□□ 0.86
CSNK1D-201ENST00000269361 VAT1LQ9HCJ6 419 aa20.44■□□□□ 0.86
CSNK1D-201ENST00000269361 GPHNQ9NQX3 736 aaPredicted RBP20.44■□□□□ 0.86
CSNK1D-201ENST00000269361 UMODL1Q5DID0 1318 aa20.44■□□□□ 0.86
CSNK1D-201ENST00000269361 DHX16O60231 1041 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-201ENST00000269361 TXNP10599 105 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-201ENST00000269361 CCL23P55773 120 aa20.43■□□□□ 0.86
CSNK1D-201ENST00000269361 QRICH1Q2TAL8 776 aa20.43■□□□□ 0.86
CSNK1D-201ENST00000269361 BRDTQ58F21 947 aaPredicted RBP20.43■□□□□ 0.86
CSNK1D-201ENST00000269361 IFIT1BQ5T764 474 aaKnown RBP20.43■□□□□ 0.86
CSNK1D-201ENST00000269361 MCF2L2Q86YR7 1114 aa20.43■□□□□ 0.86
CSNK1D-201ENST00000269361 MAFAQ8NHW3 353 aaPredicted RBP20.43■□□□□ 0.86
CSNK1D-201ENST00000269361 SYTL5Q8TDW5 730 aaPredicted RBP20.43■□□□□ 0.86
CSNK1D-201ENST00000269361 JMJD4Q9H9V9 463 aa20.43■□□□□ 0.86
CSNK1D-201ENST00000269361 A6NJR5 290 aa20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 GRXCR1A8MXD5 290 aa20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 KPNA6O60684 536 aa20.42■□□□□ 0.86
CSNK1D-201ENST00000269361 FGBP02675 491 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms