RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 CFBP00751 764 aa14.72□□□□□ -0.05
SS18-202ENST00000269138 INHAP05111 366 aa14.72□□□□□ -0.05
SS18-202ENST00000269138 HOXA13P31271 388 aaPredicted RBP14.72□□□□□ -0.05
SS18-202ENST00000269138 CYP2C19P33261 490 aa14.72□□□□□ -0.05
SS18-202ENST00000269138 SSRP1Q08945 709 aaKnown RBP14.72□□□□□ -0.05
SS18-202ENST00000269138 TRAF1Q13077 416 aa14.72□□□□□ -0.05
SS18-202ENST00000269138 PFKFB3Q16875 520 aaPredicted RBP14.72□□□□□ -0.05
SS18-202ENST00000269138 MCF2L2Q86YR7 1114 aa14.72□□□□□ -0.05
SS18-202ENST00000269138 SYTL5Q8TDW5 730 aaPredicted RBP14.72□□□□□ -0.05
SS18-202ENST00000269138 ARMC5Q96C12 935 aa14.72□□□□□ -0.05
SS18-202ENST00000269138 RNF26Q9BY78 433 aaPredicted RBP14.72□□□□□ -0.05
SS18-202ENST00000269138 DIS3Q9Y2L1 958 aaKnown RBP14.72□□□□□ -0.05
SS18-202ENST00000269138 ZNFX1Q9P2E3 1918 aaKnown RBP14.72□□□□□ -0.05
SS18-202ENST00000269138 STXBP3O00186 592 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 HMGCRP04035 888 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 SCG2P13521 617 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 HSD17B4P51659 736 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 AKAP17AQ02040 695 aaKnown RBP14.71□□□□□ -0.05
SS18-202ENST00000269138 MTFR1Q15390 333 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 OLFML2BQ68BL8 750 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 CPLX2Q6PUV4 134 aaKnown RBP14.71□□□□□ -0.05
SS18-202ENST00000269138 TRMT44Q8IYL2 757 aaKnown RBP14.71□□□□□ -0.05
SS18-202ENST00000269138 SHISA4Q96DD7 197 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 ABHD8Q96I13 439 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 ZNF333Q96JL9 665 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 ZSCAN31Q96LW9 406 aaPredicted RBP14.71□□□□□ -0.05
SS18-202ENST00000269138 TAAR1Q96RJ0 339 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 MYH6P13533 1939 aa14.71□□□□□ -0.05
SS18-202ENST00000269138 CACNB2Q08289 660 aaPredicted RBP14.71□□□□□ -0.06
SS18-202ENST00000269138 PRAMEF19Q5SWL8 479 aa14.71□□□□□ -0.06
SS18-202ENST00000269138 CCDC83Q8IWF9 413 aa14.71□□□□□ -0.06
SS18-202ENST00000269138 AIFM3Q96NN9 605 aa14.71□□□□□ -0.06
SS18-202ENST00000269138 TINF2Q9BSI4 451 aa14.71□□□□□ -0.06
SS18-202ENST00000269138 BARHL2Q9NY43 387 aa14.71□□□□□ -0.06
SS18-202ENST00000269138 GCOM1H8Y6P7 765 aaPredicted RBP14.7□□□□□ -0.06
SS18-202ENST00000269138 JAK2O60674 1132 aa14.7□□□□□ -0.06
SS18-202ENST00000269138 SNAI1O95863 264 aaPredicted RBP14.7□□□□□ -0.06
SS18-202ENST00000269138 POLR2MP0CAP2 368 aa14.7□□□□□ -0.06
SS18-202ENST00000269138 PRKAR2AP13861 404 aaKnown RBP14.7□□□□□ -0.06
SS18-202ENST00000269138 NAPAP54920 295 aa14.7□□□□□ -0.06
SS18-202ENST00000269138 GHRHRQ02643 423 aa14.7□□□□□ -0.06
SS18-202ENST00000269138 MFSD14CQ5VZR4 134 aa14.7□□□□□ -0.06
SS18-202ENST00000269138 USP17L6PQ6QN14 398 aa14.7□□□□□ -0.06
SS18-202ENST00000269138 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
SS18-202ENST00000269138 TRIM22Q8IYM9 498 aa14.7□□□□□ -0.06
SS18-202ENST00000269138 NSUN7Q8NE18 718 aaKnown RBP14.7□□□□□ -0.06
SS18-202ENST00000269138 TRPV1Q8NER1 839 aa14.7□□□□□ -0.06
SS18-202ENST00000269138 UNC93B1Q9H1C4 597 aa14.7□□□□□ -0.06
SS18-202ENST00000269138 PSTPIP2Q9H939 334 aa14.7□□□□□ -0.06
SS18-202ENST00000269138 RBM27Q9P2N5 1060 aaKnown RBP14.7□□□□□ -0.06
SS18-202ENST00000269138 MEIS2O14770 477 aa14.69□□□□□ -0.06
SS18-202ENST00000269138 ADAMTS3O15072 1205 aa14.69□□□□□ -0.06
SS18-202ENST00000269138 CDKL5O76039 1030 aa14.69□□□□□ -0.06
SS18-202ENST00000269138 FDPSP14324 419 aaKnown RBP14.69□□□□□ -0.06
SS18-202ENST00000269138 ALDH5A1P51649 535 aaPredicted RBP14.69□□□□□ -0.06
SS18-202ENST00000269138 UBE2SQ16763 222 aa14.69□□□□□ -0.06
SS18-202ENST00000269138 MAP3K21Q5TCX8 1036 aa14.69□□□□□ -0.06
SS18-202ENST00000269138 MAMDC4Q6UXC1 1216 aa14.69□□□□□ -0.06
SS18-202ENST00000269138 FCHSD1Q86WN1 690 aa14.69□□□□□ -0.06
SS18-202ENST00000269138 TMX3Q96JJ7 454 aa14.69□□□□□ -0.06
SS18-202ENST00000269138 SH2B1Q9NRF2 756 aaPredicted RBP14.69□□□□□ -0.06
SS18-202ENST00000269138 VPS54Q9P1Q0 977 aa14.69□□□□□ -0.06
SS18-202ENST00000269138 SMCO2A6NFE2 343 aa14.68□□□□□ -0.06
SS18-202ENST00000269138 DEXIO95424 95 aa14.68□□□□□ -0.06
SS18-202ENST00000269138 CCL5P13501 91 aa14.68□□□□□ -0.06
SS18-202ENST00000269138 CCND3P30281 292 aaPredicted RBP14.68□□□□□ -0.06
SS18-202ENST00000269138 UBXN2AP68543 259 aa14.68□□□□□ -0.06
SS18-202ENST00000269138 ARMCX2Q7L311 632 aa14.68□□□□□ -0.06
SS18-202ENST00000269138 RMDN3Q96TC7 470 aa14.68□□□□□ -0.06
SS18-202ENST00000269138 MAF1Q9H063 256 aa14.68□□□□□ -0.06
SS18-202ENST00000269138 ORC3Q9UBD5 711 aaPredicted RBP14.68□□□□□ -0.06
SS18-202ENST00000269138 LCTP09848 1927 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 SYNGAP1Q96PV0 1343 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 hCG_1984214I3L0E3 225 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 CYBAP13498 195 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 PPP1R18Q6NYC8 613 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 MSL3Q8N5Y2 521 aaKnown RBP14.67□□□□□ -0.06
SS18-202ENST00000269138 ZNF713Q8N859 430 aaPredicted RBP14.67□□□□□ -0.06
SS18-202ENST00000269138 IL27Q8NEV9 243 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 SMARCC2Q8TAQ2 1214 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 RIC8AQ9NPQ8 531 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 GJB4Q9NTQ9 266 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.67□□□□□ -0.06
SS18-202ENST00000269138 MAP3K20Q9NYL2 800 aaKnown RBP14.67□□□□□ -0.06
SS18-202ENST00000269138 ADD3Q9UEY8 706 aaKnown RBP14.67□□□□□ -0.06
SS18-202ENST00000269138 PLXNA1Q9UIW2 1896 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 STK36Q9NRP7 1315 aa14.67□□□□□ -0.06
SS18-202ENST00000269138 ASB14A6NK59 587 aa14.66□□□□□ -0.06
SS18-202ENST00000269138 PIK3CDO00329 1044 aa14.66□□□□□ -0.06
SS18-202ENST00000269138 ZNF865P0CJ78 1059 aaPredicted RBP14.66□□□□□ -0.06
SS18-202ENST00000269138 EIF2AK2P19525 551 aaKnown RBP14.66□□□□□ -0.06
SS18-202ENST00000269138 MCM2P49736 904 aa14.66□□□□□ -0.06
SS18-202ENST00000269138 ADCY7P51828 1080 aa14.66□□□□□ -0.06
SS18-202ENST00000269138 EEPD1Q7L9B9 569 aa14.66□□□□□ -0.06
SS18-202ENST00000269138 SAMD3Q8N6K7 520 aa14.66□□□□□ -0.06
SS18-202ENST00000269138 DNERQ8NFT8 737 aa14.66□□□□□ -0.06
SS18-202ENST00000269138 MORC4Q8TE76 937 aa14.66□□□□□ -0.06
SS18-202ENST00000269138 NSUN6Q8TEA1 469 aaKnown RBP14.66□□□□□ -0.06
SS18-202ENST00000269138 CUL5Q93034 780 aa14.66□□□□□ -0.06
SS18-202ENST00000269138 KATNBL1Q9H079 304 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms