RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 MOXD1Q6UVY6 613 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 DLK2Q6UY11 383 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.55■□□□□ 0.56
TPM1-201ENST00000267996 KRT26Q7Z3Y9 468 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 SH3RF1Q7Z6J0 888 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 POTEDQ86YR6 584 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 CCSER1Q9C0I3 900 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 HOOK1Q9UJC3 728 aaKnown RBP18.55■□□□□ 0.56
TPM1-201ENST00000267996 PPP1R9AQ9ULJ8 1098 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 MRPL11Q9Y3B7 192 aaKnown RBP18.55■□□□□ 0.56
TPM1-201ENST00000267996 ZNF536O15090 1300 aa18.55■□□□□ 0.56
TPM1-201ENST00000267996 SLC37A4O43826 429 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 ICAM1P05362 532 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 LDHDQ86WU2 507 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 PDILTQ8N807 584 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 DNAJC25Q9H1X3 360 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 TAF1DQ9H5J8 278 aaPredicted RBP18.54■□□□□ 0.56
TPM1-201ENST00000267996 RPAP3Q9H6T3 665 aaPredicted RBP18.54■□□□□ 0.56
TPM1-201ENST00000267996 SLC38A10Q9HBR0 1119 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 AFG3L2Q9Y4W6 797 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 SNCAIPQ9Y6H5 919 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 FDX1P10109 184 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 SREBF1P36956 1147 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 PNOCQ13519 176 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 CALCRLQ16602 461 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 CBX8Q9HC52 389 aa18.54■□□□□ 0.56
TPM1-201ENST00000267996 PARP14Q460N5 1801 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 POTECB2RU33 542 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 FOXN1O15353 648 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 PPP1R12BO60237 982 aaPredicted RBP18.53■□□□□ 0.56
TPM1-201ENST00000267996 ZNF165P49910 485 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 FXR2P51116 673 aaKnown RBP eCLIP18.53■□□□□ 0.56
TPM1-201ENST00000267996 NLRP12P59046 1061 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 VGLL4Q14135 290 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 POSTNQ15063 836 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 SH3D19Q5HYK7 790 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 NT5DC1Q5TFE4 455 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 IGSF22Q8N9C0 903 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 IQUBQ8NA54 791 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 DHX58Q96C10 678 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 TANGO6Q9C0B7 1094 aa18.53■□□□□ 0.56
TPM1-201ENST00000267996 DDX25Q9UHL0 483 aaKnown RBP18.53■□□□□ 0.56
TPM1-201ENST00000267996 WDR90Q96KV7 1748 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 IQCA1LA6NCM1 817 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 SPDYE3A6NKU9 549 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 FLOT1O75955 427 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 TXLNAP40222 546 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 SARSP49591 514 aaKnown RBP18.52■□□□□ 0.56
TPM1-201ENST00000267996 ARHGAP4P98171 946 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 GHRHRQ02643 423 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 C11orf57Q6ZUT1 292 aaPredicted RBP18.52■□□□□ 0.56
TPM1-201ENST00000267996 SPATA20Q8TB22 786 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 CDCA5Q96FF9 252 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 CCDC34Q96HJ3 373 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 PPP1R9BQ96SB3 815 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 PNMA2Q9UL42 364 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 PCDHA5Q9Y5H7 936 aa18.52■□□□□ 0.56
TPM1-201ENST00000267996 RLFQ13129 1914 aa18.52■□□□□ 0.55
TPM1-201ENST00000267996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.51■□□□□ 0.55
TPM1-201ENST00000267996 CYP3A4P08684 503 aa18.51■□□□□ 0.55
TPM1-201ENST00000267996 CIITAP33076 1130 aa18.51■□□□□ 0.55
TPM1-201ENST00000267996 HMGCS2P54868 508 aa18.51■□□□□ 0.55
TPM1-201ENST00000267996 PRKG1Q13976 671 aa18.51■□□□□ 0.55
TPM1-201ENST00000267996 IQCB1Q15051 598 aa18.51■□□□□ 0.55
TPM1-201ENST00000267996 PDXDC2PQ6P474 469 aa18.51■□□□□ 0.55
TPM1-201ENST00000267996 ANP32BQ92688 251 aaKnown RBP18.51■□□□□ 0.55
TPM1-201ENST00000267996 PAGE5Q96GU1 130 aa18.51■□□□□ 0.55
TPM1-201ENST00000267996 OTOFQ9HC10 1997 aa18.51■□□□□ 0.55
TPM1-201ENST00000267996 A0A087WWV3 80 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 GCOM1H8Y6P7 765 aaPredicted RBP18.5■□□□□ 0.55
TPM1-201ENST00000267996 PRR29P0C7W0 189 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 POLR2MP0CAP2 368 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 HOXA13P31271 388 aaPredicted RBP18.5■□□□□ 0.55
TPM1-201ENST00000267996 UBA7P41226 1012 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 PDIA5Q14554 519 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 CEP57L1Q8IYX8 460 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 RBM46Q8TBY0 533 aaKnown RBP18.5■□□□□ 0.55
TPM1-201ENST00000267996 TBC1D5Q92609 795 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 HAS1Q92839 578 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 PDLIM2Q96JY6 352 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 AGBL1Q96MI9 1066 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 KCNMB3Q9NPA1 279 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 DISC1Q9NRI5 854 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 CCPG1Q9ULG6 757 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 ADAMTS5Q9UNA0 930 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 PP2D1A8MPX8 630 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 CDC25AP30304 524 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 IREB2P48200 963 aaKnown RBP18.5■□□□□ 0.55
TPM1-201ENST00000267996 CCDC173Q0VFZ6 552 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 DPCR1Q3MIW9 517 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 CLEC4DQ8WXI8 215 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 CSADQ9Y600 493 aa18.5■□□□□ 0.55
TPM1-201ENST00000267996 ZBED4O75132 1171 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 CFBP00751 764 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 TECP42680 631 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 TXKP42681 527 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 HSD17B4P51659 736 aa18.49■□□□□ 0.55
TPM1-201ENST00000267996 KARSQ15046 597 aaKnown RBP18.49■□□□□ 0.55
TPM1-201ENST00000267996 ZRSR1Q15695 479 aaKnown RBP18.49■□□□□ 0.55
TPM1-201ENST00000267996 Q4G0T1 1027 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms