RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 DNAJC14Q6Y2X3 702 aaPredicted RBP9.72□□□□□ -0.85
VAPB-201ENST00000265619 CCDC50Q8IVM0 306 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 RPUSD2Q8IZ73 545 aaKnown RBP9.72□□□□□ -0.85
VAPB-201ENST00000265619 MMGT1Q8N4V1 131 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 RAPGEF5Q92565 580 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 ATP6V1G3Q96LB4 118 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 SLC12A6Q9UHW9 1150 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 SPATA31A5Q5VU36 1347 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 SPATA31A7Q8IWB4 1347 aa9.72□□□□□ -0.85
VAPB-201ENST00000265619 ERICH2A1L162 156 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 H7C1W4 665 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 ZNF263O14978 683 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 N4BP3O15049 544 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 GNPATO15228 680 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 TRAPPC3O43617 180 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 CYP19A1P11511 503 aaPredicted RBP9.71□□□□□ -0.85
VAPB-201ENST00000265619 CTCFP49711 727 aaPredicted RBP9.71□□□□□ -0.85
VAPB-201ENST00000265619 KLK7P49862 253 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 TOB1P50616 345 aaPredicted RBP9.71□□□□□ -0.85
VAPB-201ENST00000265619 ANTXR2P58335 489 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 TMEM62Q0P6H9 643 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 LACTB2Q53H82 288 aaPredicted RBP9.71□□□□□ -0.85
VAPB-201ENST00000265619 CFAP58Q5T655 872 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 TRIM58Q8NG06 486 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 MTFR1LQ9H019 292 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 PAPOLBQ9NRJ5 636 aaKnown RBP9.71□□□□□ -0.85
VAPB-201ENST00000265619 HOMER3Q9NSC5 361 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 STIM2Q9P246 746 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 CTNND2Q9UQB3 1225 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 PPP1R3GB7ZBB8 358 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 IRS4O14654 1257 aaPredicted RBP9.71□□□□□ -0.85
VAPB-201ENST00000265619 DNAJC8O75937 253 aaPredicted RBP9.71□□□□□ -0.85
VAPB-201ENST00000265619 RNF8O76064 485 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 TCIRG1Q13488 830 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 BLMHQ13867 455 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 METTL24Q5JXM2 366 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 MDM1Q8TC05 714 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 CAVIN3Q969G5 261 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 EEF2KMTQ96G04 330 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 BATF3Q9NR55 127 aa9.71□□□□□ -0.85
VAPB-201ENST00000265619 SRP68Q9UHB9 627 aaKnown RBP9.71□□□□□ -0.85
VAPB-201ENST00000265619 MYO5AQ9Y4I1 1855 aaKnown RBP9.71□□□□□ -0.85
VAPB-201ENST00000265619 C5P01031 1676 aa9.71□□□□□ -0.86
VAPB-201ENST00000265619 HSPD1P10809 573 aaKnown RBP9.71□□□□□ -0.86
VAPB-201ENST00000265619 PRPHP41219 470 aa9.71□□□□□ -0.86
VAPB-201ENST00000265619 CKAP4Q07065 602 aaKnown RBP9.71□□□□□ -0.86
VAPB-201ENST00000265619 IFIT5Q13325 482 aaKnown RBP9.71□□□□□ -0.86
VAPB-201ENST00000265619 NKX1-1Q15270 411 aaPredicted RBP9.71□□□□□ -0.86
VAPB-201ENST00000265619 LDHAL6AQ6ZMR3 332 aa9.71□□□□□ -0.86
VAPB-201ENST00000265619 KIAA1328Q86T90 577 aa9.71□□□□□ -0.86
VAPB-201ENST00000265619 EHBP1Q8NDI1 1231 aa9.71□□□□□ -0.86
VAPB-201ENST00000265619 GGA2Q9UJY4 613 aa9.71□□□□□ -0.86
VAPB-201ENST00000265619 ZNF232Q9UNY5 417 aa9.71□□□□□ -0.86
VAPB-201ENST00000265619 MAPK8IP1Q9UQF2 711 aa9.71□□□□□ -0.86
VAPB-201ENST00000265619 PLAAQ9Y263 795 aa9.71□□□□□ -0.86
VAPB-201ENST00000265619 ECM29Q5VYK3 1845 aa9.71□□□□□ -0.86
VAPB-201ENST00000265619 NKRFO15226 690 aaKnown RBP eCLIP9.7□□□□□ -0.863e-6■■□□□ 12
VAPB-201ENST00000265619 PLEKP08567 350 aaPredicted RBP9.7□□□□□ -0.86
VAPB-201ENST00000265619 PTPN12Q05209 780 aaKnown RBP9.7□□□□□ -0.86
VAPB-201ENST00000265619 FAM133BQ5BKY9 247 aaKnown RBP9.7□□□□□ -0.86
VAPB-201ENST00000265619 ARMCX6Q7L4S7 300 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 CCDC47Q96A33 483 aaKnown RBP9.7□□□□□ -0.86
VAPB-201ENST00000265619 ALG1Q9BT22 464 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 HAUS4Q9H6D7 363 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 GREM2Q9H772 168 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 KCNMB3Q9NPA1 279 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 AGPAT5Q9NUQ2 364 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 VPS54Q9P1Q0 977 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 KDM3BQ7LBC6 1761 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 C4AP0C0L4 1744 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 C4BP0C0L5 1744 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 LTBP4Q8N2S1 1624 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 SCN11AQ9UI33 1791 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 MYH1P12882 1939 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 FOXP2O15409 715 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 AHCYL1O43865 530 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 DNA2P51530 1060 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 EMC10Q5UCC4 262 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 PI16Q6UXB8 463 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 LRP10Q7Z4F1 713 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 PHC3Q8NDX5 983 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 QTRT2Q9H974 415 aaKnown RBP9.7□□□□□ -0.86
VAPB-201ENST00000265619 CCDC87Q9NVE4 849 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 CEP126Q9P2H0 1117 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 SNX12Q9UMY4 172 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 RFX7Q2KHR2 1363 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 NWD2Q9ULI1 1742 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 FILIP1LQ4L180 1135 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 EMBQ6PCB8 327 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 MAATS1Q7Z4T9 603 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 OSBPL1AQ9BXW6 950 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 EPB41L5Q9HCM4 733 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 PCMTD2Q9NV79 361 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 SALL4Q9UJQ4 1053 aa9.7□□□□□ -0.86
VAPB-201ENST00000265619 FBXO2Q9UK22 296 aaPredicted RBP9.7□□□□□ -0.86
VAPB-201ENST00000265619 CCNL1Q9UK58 526 aaPredicted RBP9.7□□□□□ -0.86
VAPB-201ENST00000265619 MOCS3O95396 460 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 GUCY2DQ02846 1103 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 TRIM68Q6AZZ1 485 aa9.69□□□□□ -0.86
VAPB-201ENST00000265619 SPATA21Q7Z572 469 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms