RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ABRAQ8N0Z2 381 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 MTMR8Q96EF0 704 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 TINF2Q9BSI4 451 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 LRRC37A2A6NM11 1700 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 PFASO15067 1338 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 ABCB11O95342 1321 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 PNMA6FA0A0J9YX94 578 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 EIF2AK2P19525 551 aaKnown RBP8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 EN2P19622 333 aaPredicted RBP8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 FOSBP53539 338 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 FUT2Q10981 343 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 UBE2SQ16763 222 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 WWC2Q6AWC2 1192 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 USP17L6PQ6QN14 398 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 ARMCX2Q7L311 632 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 FBXO16Q8IX29 292 aaPredicted RBP8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 FAM133AQ8N9E0 248 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 AIFM3Q96NN9 605 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 SLC26A6Q9BXS9 759 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 BACH2Q9BYV9 841 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 RBM28Q9NW13 759 aaKnown RBP8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 PCDH10Q9P2E7 1040 aa8.38□□□□□ -1.07
DEPDC1B-201ENST00000265036 CPLX1O14810 134 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 CD2BP2O95400 341 aaKnown RBP8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 GNAQP50148 359 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 SCRN1Q12765 414 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 ME3Q16798 604 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 TKFCQ3LXA3 575 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 MFSD14CQ5VZR4 134 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 PGBD1Q96JS3 809 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 MAP3K14Q99558 947 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 TMEM106CQ9BVX2 250 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 SLC5A4Q9NY91 659 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 ADCY6O43306 1168 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 CYBAP13498 195 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 IRX5P78411 483 aaPredicted RBP8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 TMEM63BQ5T3F8 832 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 GJC2Q5T442 439 aaPredicted RBP8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 SYTL5Q8TDW5 730 aaPredicted RBP8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 U2AF1L4Q8WU68 220 aaKnown RBP8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 SHISA4Q96DD7 197 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 TAAR1Q96RJ0 339 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 SLKQ9H2G2 1235 aaPredicted RBP8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 HMX1Q9NP08 348 aaPredicted RBP8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 MRPL11Q9Y3B7 192 aaKnown RBP8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 DOCK5Q9H7D0 1870 aa8.37□□□□□ -1.07
DEPDC1B-201ENST00000265036 KIAA1217Q5T5P2 1943 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 ADAMTS3O15072 1205 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 SNAI1O95863 264 aaPredicted RBP8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 RBM25P49756 843 aaKnown RBP8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 ALDH5A1P51649 535 aaPredicted RBP8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 NAPAP54920 295 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 NTRK3Q16288 839 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 MAP3K21Q5TCX8 1036 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 IL31RAQ8NI17 732 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 TBC1D32Q96NH3 1257 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 LZTS2Q9BRK4 669 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 GJB4Q9NTQ9 266 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 CNPY2Q9Y2B0 182 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 RPTORQ8N122 1335 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 ST3GAL1Q11201 340 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 OLFML2BQ68BL8 750 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 FBXL16Q8N461 479 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 DIS3LQ8TF46 1054 aaKnown RBP8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 RMDN3Q96TC7 470 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 PAK6Q9NQU5 681 aaPredicted RBP8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 PDGFCQ9NRA1 345 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 VPS54Q9P1Q0 977 aa8.36□□□□□ -1.07
DEPDC1B-201ENST00000265036 NID2Q14112 1375 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 CCDC196A0A1B0GTZ2 297 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 SORBS3O60504 671 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 JAK2O60674 1132 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 EIF5BO60841 1220 aaKnown RBP8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 MYCLP12524 364 aaPredicted RBP8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 EVCP57679 992 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 CCDC83Q8IWF9 413 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 RASGRP4Q8TDF6 673 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 STXBP3O00186 592 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 PGK1P00558 417 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 SCG2P13521 617 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 ADCYAP1R1P41586 468 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 RCAN1P53805 252 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 AKAP17AQ02040 695 aaKnown RBP8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 PKN1Q16512 942 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 CCDC144BQ3MJ40 725 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 SMARCC2Q8TAQ2 1214 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 IL17RAQ96F46 866 aa8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 ZNF274Q96GC6 653 aaPredicted RBP8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 ADD3Q9UEY8 706 aaKnown RBP8.35□□□□□ -1.07
DEPDC1B-201ENST00000265036 GCOM1H8Y6P7 765 aaPredicted RBP8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 PFKFB2O60825 505 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 CTDNEP1O95476 244 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 TFRCP02786 760 aaKnown RBP8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 GJB1P08034 283 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 POLR2MP0CAP2 368 aa8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 ZNF865P0CJ78 1059 aaPredicted RBP8.34□□□□□ -1.07
DEPDC1B-201ENST00000265036 IFNAR1P17181 557 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms