RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 A0A0G2JLW4 131 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 EPB41P11171 864 aaKnown RBP16.54■□□□□ 0.24
CASC3-201ENST00000264645 MDH1P40925 334 aaKnown RBP16.54■□□□□ 0.24
CASC3-201ENST00000264645 MYOCDQ8IZQ8 938 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 DAAM1Q9Y4D1 1078 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 USP42Q9H9J4 1324 aaKnown RBP16.54■□□□□ 0.24
CASC3-201ENST00000264645 MMEP08473 750 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 ZCRB1Q8TBF4 217 aaKnown RBP16.54■□□□□ 0.24
CASC3-201ENST00000264645 WDR66Q8TBY9 1149 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 CABLES1Q8TDN4 633 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 ARHGAP31Q2M1Z3 1444 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 PHKA1P46020 1223 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 LRRC41Q15345 812 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 ANKRD20A3Q5VUR7 823 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 NUGGCQ68CJ6 796 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 MIPOL1Q8TD10 442 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 LPIN2Q92539 896 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 ZSCAN10Q96SZ4 725 aaPredicted RBP16.54■□□□□ 0.24
CASC3-201ENST00000264645 CNOT10Q9H9A5 744 aaKnown RBP16.54■□□□□ 0.24
CASC3-201ENST00000264645 CDC42BPAQ5VT25 1732 aa16.54■□□□□ 0.24
CASC3-201ENST00000264645 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 USP17L21D6R901 530 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 H0Y3Z8 333 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 CCNE1P24864 410 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 EP400NLQ6ZTU2 488 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 CYB5R4Q7L1T6 521 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 MB21D2Q8IYB1 491 aaPredicted RBP16.53■□□□□ 0.24
CASC3-201ENST00000264645 EHD4Q9H223 541 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 SLC40A1Q9NP59 571 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 SCP2P22307 547 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 GLE1Q53GS7 698 aaKnown RBP16.53■□□□□ 0.24
CASC3-201ENST00000264645 FMO2Q99518 471 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 SNX12Q9UMY4 172 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 PACSIN2Q9UNF0 486 aaPredicted RBP16.53■□□□□ 0.24
CASC3-201ENST00000264645 PCDHB13Q9Y5F0 798 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 CDHR2Q9BYE9 1310 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 PALMO75781 387 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 CIB2O75838 187 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 ARHGAP44Q17R89 818 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 ZIM3Q96PE6 472 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 NDST4Q9H3R1 872 aa16.53■□□□□ 0.24
CASC3-201ENST00000264645 SPDYE3A6NKU9 549 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 PRKAB2O43741 272 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 STAT1P42224 750 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 UBE3CQ15386 1083 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 CCDC62Q6P9F0 684 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 TBC1D10CQ8IV04 446 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 ZNF579Q8NAF0 562 aaKnown RBP16.52■□□□□ 0.24
CASC3-201ENST00000264645 ARL8AQ96BM9 186 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 THAP9Q9H5L6 903 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 USH1CQ9Y6N9 552 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 PDHA1P08559 390 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 KCNA6P17658 529 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 LIFRP42702 1097 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 PPP2R2AP63151 447 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 MAN2A1Q16706 1144 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 WDR93Q6P2C0 686 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
CASC3-201ENST00000264645 GPR108Q9NPR9 543 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 DONSONQ9NYP3 566 aa16.52■□□□□ 0.24
CASC3-201ENST00000264645 MAP2K7O14733 419 aa16.52■□□□□ 0.23
CASC3-201ENST00000264645 FAM13AO94988 1023 aa16.52■□□□□ 0.23
CASC3-201ENST00000264645 RBM5P52756 815 aaKnown RBP eCLIP16.52■□□□□ 0.232e-6■■■■□ 23
CASC3-201ENST00000264645 HDLBPQ00341 1268 aaKnown RBP16.52■□□□□ 0.23
CASC3-201ENST00000264645 OTUD6AQ7L8S5 288 aa16.52■□□□□ 0.23
CASC3-201ENST00000264645 FAM133AQ8N9E0 248 aa16.52■□□□□ 0.23
CASC3-201ENST00000264645 RNPC3Q96LT9 517 aaKnown RBP16.52■□□□□ 0.23
CASC3-201ENST00000264645 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.23
CASC3-201ENST00000264645 SATB1Q01826 763 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 CALCRLQ16602 461 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.51■□□□□ 0.23
CASC3-201ENST00000264645 GGT7Q9UJ14 662 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 GRIN1Q05586 938 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 CCDC174Q6PII3 467 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 SPATA24Q86W54 205 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 RPUSD2Q8IZ73 545 aaKnown RBP16.51■□□□□ 0.23
CASC3-201ENST00000264645 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 MS4A14Q96JA4 679 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 PARP2Q9UGN5 583 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 TNRQ92752 1358 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 BAG2O95816 211 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 GCFC2P16383 781 aaKnown RBP16.51■□□□□ 0.23
CASC3-201ENST00000264645 GFPT1Q06210 699 aaPredicted RBP16.51■□□□□ 0.23
CASC3-201ENST00000264645 CAPN12Q6ZSI9 719 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 CCHCR1Q8TD31 782 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 PTPN22Q9Y2R2 807 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 LDHCP07864 332 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 TMOD1P28289 359 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 ADD2P35612 726 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 BIRC3Q13489 604 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 CCDC13Q8IYE1 715 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 KCNB2Q92953 911 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 PSMD1Q99460 953 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 DDX47Q9H0S4 455 aaKnown RBP16.51■□□□□ 0.23
CASC3-201ENST00000264645 RAB21Q9UL25 225 aa16.51■□□□□ 0.23
CASC3-201ENST00000264645 PHF20L1A8MW92 1017 aa16.5■□□□□ 0.23
CASC3-201ENST00000264645 OR52Z1P0C646 297 aa16.5■□□□□ 0.23
CASC3-201ENST00000264645 SEPT14Q6ZU15 432 aa16.5■□□□□ 0.23
CASC3-201ENST00000264645 GDAP1Q8TB36 358 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms