RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 FGFR1OPO95684 399 aaKnown RBP13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 FAM107AO95990 144 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 MDH1P40925 334 aaKnown RBP13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 MAGEA1P43355 309 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 PSEN1P49768 467 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 ATP1A2P50993 1020 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 KIF11P52732 1056 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 NLRP14Q86W24 1093 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 EIF1ADQ8N9N8 165 aaKnown RBP13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 ATP6V1G3Q96LB4 118 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 RNPC3Q96LT9 517 aaKnown RBP13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 CCT8L2Q96SF2 557 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 DUSP9Q99956 384 aaKnown RBP13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 CCSER1Q9C0I3 900 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 KBTBD4Q9NVX7 518 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 ZNF330Q9Y3S2 320 aaPredicted RBP13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 CAPN6Q9Y6Q1 641 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 GRID2IPA4D2P6 1211 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 KLRC4O43908 158 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 TROAPQ12815 778 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 NKX1-1Q15270 411 aaPredicted RBP13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 CCDC40Q4G0X9 1142 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 NFRKBQ6P4R8 1299 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 ARHGAP27Q6ZUM4 889 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 PAXIP1Q6ZW49 1069 aaPredicted RBP13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 TAX1BP1Q86VP1 789 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 NLRP10Q86W26 655 aa13.74□□□□□ -0.21
CHMP2B-201ENST00000263780 MYH6P13533 1939 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 LAD1O00515 517 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 ZNF263O14978 683 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 TYW1BQ6NUM6 668 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 LRIG3Q6UXM1 1119 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 CCDC121Q6ZUS5 278 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 C2CD5Q86YS7 1000 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 C4orf32Q8N8J7 132 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 EDEM3Q9BZQ6 932 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 MLXIPQ9HAP2 919 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 LRP2BPQ9P2M1 347 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 NF2P35240 595 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 AMPD3Q01432 767 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 PFKFB3Q16875 520 aaPredicted RBP13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 PREPLQ4J6C6 727 aaPredicted RBP13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 COBLL1Q53SF7 1204 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 KCTD16Q68DU8 428 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 MYCBPAPQ8TBZ2 947 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 HINFPQ9BQA5 517 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 SH3GLB2Q9NR46 395 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 UBR2Q8IWV8 1755 aa13.73□□□□□ -0.21
CHMP2B-201ENST00000263780 ABCB11O95342 1321 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 CNTNAP5Q8WYK1 1306 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 ZNF233A6NK53 670 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 STARD3NLO95772 234 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 KRT14P02533 472 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 HOXA7P31268 230 aaPredicted RBP13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 EIF4A3P38919 411 aaKnown RBP13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 KRT26Q7Z3Y9 468 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 SMCR8Q8TEV9 937 aaPredicted RBP13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 RBM12Q9NTZ6 932 aaKnown RBP13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 SPATA31A3Q5VYP0 1347 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 TNS2Q63HR2 1409 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 RASSF9O75901 435 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 HEXIM1O94992 359 aaKnown RBP13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 NAALADL2Q58DX5 795 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 MIIPQ5JXC2 388 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 ARMC9Q7Z3E5 817 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 BLIDQ8IZY5 108 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 MAGEC3Q8TD91 643 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 P3H4Q92791 437 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 ZKSCAN4Q969J2 545 aaPredicted RBP13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 NUCKS1Q9H1E3 243 aaKnown RBP13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 EPB41L5Q9HCM4 733 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 ARHGAP20Q9P2F6 1191 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 NFU1Q9UMS0 254 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 SUFUQ9UMX1 484 aa13.72□□□□□ -0.21
CHMP2B-201ENST00000263780 MAGEB6P1A0A0J9YX57 407 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 SSU72P8A0A1W2PR75 194 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 CYP7A1P22680 504 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 KIF5BP33176 963 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 KLK7P49862 253 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 GUCY1A3Q02108 690 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 CEP85LQ5SZL2 805 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 ANKRD40Q6AI12 368 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 CNNM4Q6P4Q7 775 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 CCDC13Q8IYE1 715 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 IFT81Q8WYA0 676 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 AK8Q96MA6 479 aa13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 TRMT112Q9UI30 125 aaKnown RBP13.71□□□□□ -0.21
CHMP2B-201ENST00000263780 PRPHP41219 470 aa13.71□□□□□ -0.22
CHMP2B-201ENST00000263780 CARSP49589 748 aaKnown RBP13.71□□□□□ -0.22
CHMP2B-201ENST00000263780 TNNC1P63316 161 aa13.71□□□□□ -0.22
CHMP2B-201ENST00000263780 GUCY2DQ02846 1103 aa13.71□□□□□ -0.22
CHMP2B-201ENST00000263780 PDE4DQ08499 809 aa13.71□□□□□ -0.22
CHMP2B-201ENST00000263780 IFT88Q13099 833 aa13.71□□□□□ -0.22
CHMP2B-201ENST00000263780 VWA3BQ502W6 1294 aa13.71□□□□□ -0.22
CHMP2B-201ENST00000263780 MIGA1Q8NAN2 632 aa13.71□□□□□ -0.22
CHMP2B-201ENST00000263780 CCDC114Q96M63 670 aa13.71□□□□□ -0.22
CHMP2B-201ENST00000263780 TLR10Q9BXR5 811 aa13.71□□□□□ -0.22
CHMP2B-201ENST00000263780 MCM8Q9UJA3 840 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms