RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 RASSF8Q8NHQ8 419 aa17.86■□□□□ 0.45
VPS26A-201ENST00000263559 GSDMAQ96QA5 445 aa17.86■□□□□ 0.45
VPS26A-201ENST00000263559 PLIN2Q99541 437 aa17.86■□□□□ 0.45
VPS26A-201ENST00000263559 OPLAHO14841 1288 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 CABP7Q86V35 215 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 FEZ1Q99689 392 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 DDX25Q9UHL0 483 aaKnown RBP17.85■□□□□ 0.45
VPS26A-201ENST00000263559 ZKSCAN5Q9Y2L8 839 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 PLA2G6O60733 806 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 CUL4BQ13620 913 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 PRAMEF18Q5VWM3 479 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.85■□□□□ 0.45
VPS26A-201ENST00000263559 ZNF830Q96NB3 372 aaPredicted RBP17.85■□□□□ 0.45
VPS26A-201ENST00000263559 HSD3B7Q9H2F3 369 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 RANBP17Q9H2T7 1088 aaKnown RBP17.85■□□□□ 0.45
VPS26A-201ENST00000263559 FBXO28Q9NVF7 368 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 GTPBP6O43824 516 aaPredicted RBP17.85■□□□□ 0.45
VPS26A-201ENST00000263559 INPP5BP32019 993 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 EPS15P42566 896 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 MYL5Q02045 173 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 AP3B2Q13367 1082 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 CCDC174Q6PII3 467 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 DRC7Q8IY82 874 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 LRRC15Q8TF66 581 aa17.85■□□□□ 0.45
VPS26A-201ENST00000263559 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.85■□□□□ 0.451e-6■■■■□ 21.7
VPS26A-201ENST00000263559 FXR2P51116 673 aaKnown RBP eCLIP17.84■□□□□ 0.45
VPS26A-201ENST00000263559 TPM4P67936 248 aa17.84■□□□□ 0.45
VPS26A-201ENST00000263559 SAMD1Q6SPF0 538 aaPredicted RBP17.84■□□□□ 0.45
VPS26A-201ENST00000263559 FAM160B2Q86V87 743 aa17.84■□□□□ 0.45
VPS26A-201ENST00000263559 MRFAP1L1Q96HT8 127 aa17.84■□□□□ 0.45
VPS26A-201ENST00000263559 MMTAG2Q9BU76 263 aaKnown RBP17.84■□□□□ 0.45
VPS26A-201ENST00000263559 FEM1BQ9UK73 627 aa17.84■□□□□ 0.45
VPS26A-201ENST00000263559 GCFC2P16383 781 aaKnown RBP17.84■□□□□ 0.45
VPS26A-201ENST00000263559 MSNP26038 577 aaKnown RBP17.84■□□□□ 0.45
VPS26A-201ENST00000263559 LMOD1P29536 600 aaPredicted RBP17.84■□□□□ 0.45
VPS26A-201ENST00000263559 USP11P51784 963 aa17.84■□□□□ 0.45
VPS26A-201ENST00000263559 HIRAP54198 1017 aaPredicted RBP17.84■□□□□ 0.45
VPS26A-201ENST00000263559 APOBEC3FQ8IUX4 373 aaKnown RBP17.84■□□□□ 0.45
VPS26A-201ENST00000263559 HAS1Q92839 578 aa17.84■□□□□ 0.45
VPS26A-201ENST00000263559 DACH1Q9UI36 760 aa17.84■□□□□ 0.45
VPS26A-201ENST00000263559 TTC12Q9H892 705 aaPredicted RBP17.83■□□□□ 0.44
VPS26A-201ENST00000263559 GINM1Q9NU53 330 aa17.83■□□□□ 0.44
VPS26A-201ENST00000263559 LRWD1Q9UFC0 647 aa17.83■□□□□ 0.44
VPS26A-201ENST00000263559 POLR2AP24928 1970 aaKnown RBP17.83■□□□□ 0.44
VPS26A-201ENST00000263559 PLCG1P19174 1290 aa17.83■□□□□ 0.44
VPS26A-201ENST00000263559 CDC25BP30305 580 aa17.83■□□□□ 0.44
VPS26A-201ENST00000263559 HOXA13P31271 388 aaPredicted RBP17.83■□□□□ 0.44
VPS26A-201ENST00000263559 FMR1Q06787 632 aaKnown RBP eCLIP17.83■□□□□ 0.441e-8■□□□□ 10
VPS26A-201ENST00000263559 TMEM266Q2M3C6 531 aa17.83■□□□□ 0.44
VPS26A-201ENST00000263559 DCAF15Q66K64 600 aa17.83■□□□□ 0.44
VPS26A-201ENST00000263559 MCTP2Q6DN12 878 aa17.83■□□□□ 0.44
VPS26A-201ENST00000263559 CRYGNQ8WXF5 182 aa17.83■□□□□ 0.44
VPS26A-201ENST00000263559 NAP1L4Q99733 375 aaKnown RBP17.83■□□□□ 0.44
VPS26A-201ENST00000263559 GOLGA6L6A8MZA4 724 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 DGKZQ13574 1117 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 PDIA5Q14554 519 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 GJA10Q969M2 543 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 KIAA1683Q9H0B3 1180 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 GGA3Q9NZ52 723 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 NRBP1Q9UHY1 535 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 FZD1Q9UP38 647 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 SPDYE3A6NKU9 549 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 FOSP01100 380 aaPredicted RBP17.82■□□□□ 0.44
VPS26A-201ENST00000263559 ATP1A3P13637 1013 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 TRAF1Q13077 416 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 MED15Q96RN5 788 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 SYT17Q9BSW7 474 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 KBTBD4Q9NVX7 518 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 FANCLQ9NW38 375 aa17.82■□□□□ 0.44
VPS26A-201ENST00000263559 DOCK1Q14185 1865 aa17.81■□□□□ 0.44
VPS26A-201ENST00000263559 CYP3A7-CYP3A51PA0A087WV96 503 aa17.81■□□□□ 0.44
VPS26A-201ENST00000263559 POTEMA6NI47 508 aa17.81■□□□□ 0.44
VPS26A-201ENST00000263559 CD44P16070 742 aaKnown RBP17.81■□□□□ 0.44
VPS26A-201ENST00000263559 CYP3A7P24462 503 aa17.81■□□□□ 0.44
VPS26A-201ENST00000263559 ARHGAP4P98171 946 aa17.81■□□□□ 0.44
VPS26A-201ENST00000263559 SMYD4Q8IYR2 804 aaPredicted RBP17.81■□□□□ 0.44
VPS26A-201ENST00000263559 TBC1D5Q92609 795 aa17.81■□□□□ 0.44
VPS26A-201ENST00000263559 ZNF112Q9UJU3 913 aa17.81■□□□□ 0.44
VPS26A-201ENST00000263559 PIK3CDO00329 1044 aa17.81■□□□□ 0.44
VPS26A-201ENST00000263559 DDNO94850 711 aaPredicted RBP17.81■□□□□ 0.44
VPS26A-201ENST00000263559 ZKSCAN4Q969J2 545 aaPredicted RBP17.81■□□□□ 0.44
VPS26A-201ENST00000263559 RAB34Q9BZG1 259 aa17.81■□□□□ 0.44
VPS26A-201ENST00000263559 MARCH6O60337 910 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 RPN1P04843 607 aaKnown RBP17.8■□□□□ 0.44
VPS26A-201ENST00000263559 TRMT44Q8IYL2 757 aaKnown RBP17.8■□□□□ 0.44
VPS26A-201ENST00000263559 ENOX1Q8TC92 643 aaKnown RBP17.8■□□□□ 0.44
VPS26A-201ENST00000263559 LPAR1Q92633 364 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 CALML4Q96GE6 196 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 MBOAT7Q96N66 472 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 CUEDC2Q9H467 287 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 IFNKQ9P0W0 207 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 WDR46O15213 610 aaKnown RBP17.8■□□□□ 0.44
VPS26A-201ENST00000263559 CFBP00751 764 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 ERCC5P28715 1186 aaPredicted RBP17.8■□□□□ 0.44
VPS26A-201ENST00000263559 SREBF1P36956 1147 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 CCDC186Q7Z3E2 898 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 UIMC1Q96RL1 719 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 XPO4Q9C0E2 1151 aaKnown RBP17.8■□□□□ 0.44
VPS26A-201ENST00000263559 PCDHA12Q9UN75 941 aa17.8■□□□□ 0.44
VPS26A-201ENST00000263559 PPP1R3GB7ZBB8 358 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms