RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 STK3Q13188 491 aa21.63■■□□□ 1.05
CYSTM1-201ENST00000261811 MAMDC4Q6UXC1 1216 aa21.63■■□□□ 1.05
CYSTM1-201ENST00000261811 FAM133AQ8N9E0 248 aa21.63■■□□□ 1.05
CYSTM1-201ENST00000261811 DNERQ8NFT8 737 aa21.63■■□□□ 1.05
CYSTM1-201ENST00000261811 CUL5Q93034 780 aa21.63■■□□□ 1.05
CYSTM1-201ENST00000261811 FAM217BQ9NTX9 383 aaPredicted RBP21.63■■□□□ 1.05
CYSTM1-201ENST00000261811 FLRT1Q9NZU1 646 aa21.63■■□□□ 1.05
CYSTM1-201ENST00000261811 NRBP1Q9UHY1 535 aa21.63■■□□□ 1.05
CYSTM1-201ENST00000261811 V9GY48 417 aaPredicted RBP21.63■■□□□ 1.05
CYSTM1-201ENST00000261811 PPP1R11O60927 126 aaPredicted RBP21.62■■□□□ 1.05
CYSTM1-201ENST00000261811 MYCP01106 439 aaPredicted RBP21.62■■□□□ 1.05
CYSTM1-201ENST00000261811 TAL1P17542 331 aaPredicted RBP21.62■■□□□ 1.05
CYSTM1-201ENST00000261811 CYP2C19P33261 490 aa21.62■■□□□ 1.05
CYSTM1-201ENST00000261811 CACNB2Q08289 660 aaPredicted RBP21.62■■□□□ 1.05
CYSTM1-201ENST00000261811 HEATR3Q7Z4Q2 680 aa21.62■■□□□ 1.05
CYSTM1-201ENST00000261811 TBC1D32Q96NH3 1257 aa21.62■■□□□ 1.05
CYSTM1-201ENST00000261811 LARP6Q9BRS8 491 aaKnown RBP21.62■■□□□ 1.05
CYSTM1-201ENST00000261811 RNF26Q9BY78 433 aaPredicted RBP21.62■■□□□ 1.05
CYSTM1-201ENST00000261811 KIAA0100Q14667 2235 aaKnown RBP21.62■■□□□ 1.05
CYSTM1-201ENST00000261811 GCOM1H8Y6P7 765 aaPredicted RBP21.61■■□□□ 1.05
CYSTM1-201ENST00000261811 POLR2MP0CAP2 368 aa21.61■■□□□ 1.05
CYSTM1-201ENST00000261811 IFNAR1P17181 557 aa21.61■■□□□ 1.05
CYSTM1-201ENST00000261811 CNTN2Q02246 1040 aa21.61■■□□□ 1.05
CYSTM1-201ENST00000261811 MAP3K21Q5TCX8 1036 aa21.61■■□□□ 1.05
CYSTM1-201ENST00000261811 CCDC12Q8WUD4 166 aaPredicted RBP21.61■■□□□ 1.05
CYSTM1-201ENST00000261811 FRMPD3Q5JV73 1810 aa21.61■■□□□ 1.05
CYSTM1-201ENST00000261811 KIAA1217Q5T5P2 1943 aa21.61■■□□□ 1.05
CYSTM1-201ENST00000261811 PRPF3O43395 683 aaKnown RBP21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 MSCO60682 206 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 PFKFB2O60825 505 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 CNGA1P29973 690 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 SSRP1Q08945 709 aaKnown RBP21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 FUT2Q10981 343 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 PPP1R18Q6NYC8 613 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 SLC30A10Q6XR72 485 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 TEX2Q8IWB9 1127 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 GLT8D2Q9H1C3 349 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 UNC93B1Q9H1C4 597 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 ABHD16BQ9H3Z7 469 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 NCOA5Q9HCD5 579 aaKnown RBP21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 TPCN1Q9ULQ1 816 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 LIMCH1Q9UPQ0 1083 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 HTTP42858 3142 aa21.6■■□□□ 1.05
CYSTM1-201ENST00000261811 hCG_1642624A0A1W2PR95 340 aa21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 CAPN15O75808 1086 aa21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 GJB1P08034 283 aa21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 HSD17B4P51659 736 aa21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 NAPAP54920 295 aa21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 MTFR1Q15390 333 aa21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 NOL8Q76FK4 1167 aaKnown RBP21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 SMARCC2Q8TAQ2 1214 aa21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 NSUN6Q8TEA1 469 aaKnown RBP21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 ZSCAN31Q96LW9 406 aaPredicted RBP21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 KIF2CQ99661 725 aa21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 SLC26A6Q9BXS9 759 aa21.59■■□□□ 1.05
CYSTM1-201ENST00000261811 SOWAHBA6NEL2 793 aa21.58■■□□□ 1.05
CYSTM1-201ENST00000261811 SCG2P13521 617 aa21.58■■□□□ 1.05
CYSTM1-201ENST00000261811 ALDH5A1P51649 535 aaPredicted RBP21.58■■□□□ 1.05
CYSTM1-201ENST00000261811 GHRHRQ02643 423 aa21.58■■□□□ 1.05
CYSTM1-201ENST00000261811 TRIM32Q13049 653 aa21.58■■□□□ 1.05
CYSTM1-201ENST00000261811 PFKFB3Q16875 520 aaPredicted RBP21.58■■□□□ 1.05
CYSTM1-201ENST00000261811 ARMCX2Q7L311 632 aa21.58■■□□□ 1.05
CYSTM1-201ENST00000261811 PSTPIP2Q9H939 334 aa21.58■■□□□ 1.05
CYSTM1-201ENST00000261811 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.58■■□□□ 1.05
CYSTM1-201ENST00000261811 IGHA2P01877 340 aa21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 CYBAP13498 195 aa21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 PDE4DQ08499 809 aa21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 NTRK3Q16288 839 aa21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 ARHGEF16Q5VV41 709 aa21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 SYTL5Q8TDW5 730 aaPredicted RBP21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 PHKBQ93100 1093 aa21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 IWS1Q96ST2 819 aa21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 RMDN3Q96TC7 470 aa21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 PAK6Q9NQU5 681 aaPredicted RBP21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 BARHL2Q9NY43 387 aa21.57■■□□□ 1.04
CYSTM1-201ENST00000261811 DEXIO95424 95 aa21.56■■□□□ 1.04
CYSTM1-201ENST00000261811 MCM2P49736 904 aa21.56■■□□□ 1.04
CYSTM1-201ENST00000261811 SCRN1Q12765 414 aa21.56■■□□□ 1.04
CYSTM1-201ENST00000261811 TBC1D5Q92609 795 aa21.56■■□□□ 1.04
CYSTM1-201ENST00000261811 GPKOWQ92917 476 aaPredicted RBP eCLIP21.56■■□□□ 1.04
CYSTM1-201ENST00000261811 DEFB118Q96PH6 123 aa21.56■■□□□ 1.04
CYSTM1-201ENST00000261811 SH2B1Q9NRF2 756 aaPredicted RBP21.56■■□□□ 1.04
CYSTM1-201ENST00000261811 CENPFP49454 3210 aa21.56■■□□□ 1.04
CYSTM1-201ENST00000261811 PIK3CDO00329 1044 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 OPLAHO14841 1288 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 SEPT4O43236 478 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 CCND3P30281 292 aaPredicted RBP21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 ACVR2BQ13705 512 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 WWC2Q6AWC2 1192 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 CCDC148Q8NFR7 591 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 WASF1Q92558 559 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 FGD4Q96M96 766 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 EHMT1Q9H9B1 1298 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 ZHX1Q9UKY1 873 aaPredicted RBP21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 FAM184BQ9ULE4 1060 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 LRRC37A2A6NM11 1700 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 SGPL1O95470 568 aa21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 SNAI1O95863 264 aaPredicted RBP21.55■■□□□ 1.04
CYSTM1-201ENST00000261811 TFRCP02786 760 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms