RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 ZMYND10O75800 440 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 MYL1P05976 194 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 GSTO1P78417 241 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 GRAPQ13588 217 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 CASP8Q14790 479 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 DYMQ7RTS9 669 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 TEX11Q8IYF3 940 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 GRAPLQ8TC17 118 aaPredicted RBP18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 JAKMIP2Q96AA8 810 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 C6orf50Q9HD87 102 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 SBF2Q86WG5 1849 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 LRRIQ3A6PVS8 624 aaPredicted RBP18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 LMAN1P49257 510 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 EIF6P56537 245 aaKnown RBP18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 GPSM2P81274 684 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 MEA1Q16626 185 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 TAF3Q5VWG9 929 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 KRT25Q7Z3Z0 450 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 CLEC10AQ8IUN9 316 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 COA7Q96BR5 231 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 RRP36Q96EU6 259 aaKnown RBP18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 SPZ1Q9BXG8 430 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 SAR1BQ9Y6B6 198 aa18.28■□□□□ 0.52
TM9SF1-201ENST00000261789 EPHB6O15197 1021 aa18.27■□□□□ 0.52
TM9SF1-201ENST00000261789 ZNF804AQ7Z570 1209 aa18.27■□□□□ 0.52
TM9SF1-201ENST00000261789 CERKQ8TCT0 537 aa18.27■□□□□ 0.52
TM9SF1-201ENST00000261789 SMCR8Q8TEV9 937 aaPredicted RBP18.27■□□□□ 0.52
TM9SF1-201ENST00000261789 GDAP1L1Q96MZ0 367 aa18.27■□□□□ 0.52
TM9SF1-201ENST00000261789 C7orf25Q9BPX7 421 aa18.27■□□□□ 0.52
TM9SF1-201ENST00000261789 SEC63Q9UGP8 760 aaKnown RBP18.27■□□□□ 0.52
TM9SF1-201ENST00000261789 LEMD3Q9Y2U8 911 aa18.27■□□□□ 0.52
TM9SF1-201ENST00000261789 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.52
TM9SF1-201ENST00000261789 RC3H1Q5TC82 1133 aaKnown RBP18.27■□□□□ 0.51
TM9SF1-201ENST00000261789 SOGA3Q5TF21 947 aa18.27■□□□□ 0.51
TM9SF1-201ENST00000261789 C16orf86Q6ZW13 317 aa18.27■□□□□ 0.51
TM9SF1-201ENST00000261789 AK8Q96MA6 479 aa18.27■□□□□ 0.51
TM9SF1-201ENST00000261789 UIMC1Q96RL1 719 aa18.27■□□□□ 0.51
TM9SF1-201ENST00000261789 NAV1Q8NEY1 1877 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 ZNF263O14978 683 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 SLC37A4O43826 429 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 GNA11P29992 359 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 RFC4P35249 363 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 GJA10Q969M2 543 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 CD209Q9NNX6 404 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 ZNHIT6Q9NWK9 470 aaKnown RBP18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 CALCOCO1Q9P1Z2 691 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 FAN1Q9Y2M0 1017 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 BICDL2A1A5D9 508 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 POTEMA6NI47 508 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 UFL1O94874 794 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 TDP2O95551 362 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 KRT83P78385 493 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 ZBED6P86452 979 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 TMED8Q6PL24 325 aaPredicted RBP18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 REXO1Q8N1G1 1221 aaKnown RBP18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 GLIS3Q8NEA6 775 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 NEDD1Q8NHV4 660 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 CCDC102AQ96A19 550 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 NUDT12Q9BQG2 462 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 LZTS2Q9BRK4 669 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 CUEDC2Q9H467 287 aa18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 FAM207AQ9NSI2 230 aaPredicted RBP18.26■□□□□ 0.51
TM9SF1-201ENST00000261789 MYMKA6NI61 221 aa18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 KRT86O43790 486 aa18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 LDHCP07864 332 aa18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 CYLC1P35663 651 aaPredicted RBP18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 ATP2B2Q01814 1243 aa18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 GRB10Q13322 594 aa18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 NOC3LQ8WTT2 800 aaKnown RBP18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 CCDC47Q96A33 483 aaKnown RBP18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 BLOC1S4Q9NUP1 217 aa18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 PDE2AO00408 941 aaPredicted RBP18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 EDIL3O43854 480 aa18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 LRRC47Q8N1G4 583 aaKnown RBP18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 LRWD1Q9UFC0 647 aa18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 COL24A1Q17RW2 1714 aa18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 DDX60LQ5H9U9 1706 aaKnown RBP18.25■□□□□ 0.51
TM9SF1-201ENST00000261789 GPS2Q13227 327 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 PAPD7Q5XG87 772 aaKnown RBP18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 GSPT2Q8IYD1 628 aaKnown RBP18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 TXLNBQ8N3L3 684 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 CNBD1Q8NA66 436 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 CALML4Q96GE6 196 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 DRC1Q96MC2 740 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 USP14P54578 494 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 RHBDL3P58872 404 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 LRRC41Q15345 812 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 CALCRLQ16602 461 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 MFSD14BQ5SR56 506 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 PNMA5Q96PV4 448 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 NUP58Q9BVL2 599 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 ZNF287Q9HBT7 754 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 JADE2Q9NQC1 790 aa18.24■□□□□ 0.51
TM9SF1-201ENST00000261789 GPR75-ASB3A0A0A6YYF3 556 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 IPO7O95373 1038 aaKnown RBP18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 IDEP14735 1019 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 PICALMQ13492 652 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 CNNM4Q6P4Q7 775 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 SV2BQ7L1I2 683 aa18.23■□□□□ 0.51
TM9SF1-201ENST00000261789 KCNK18Q7Z418 384 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms