RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 TTLL1O95922 423 aa12.7□□□□□ -0.38
SLC3A1-201ENST00000260649 TUBB4AP04350 444 aa12.7□□□□□ -0.38
SLC3A1-201ENST00000260649 SHMT1P34896 483 aa12.7□□□□□ -0.38
SLC3A1-201ENST00000260649 RAD51AP2Q09MP3 1159 aa12.7□□□□□ -0.38
SLC3A1-201ENST00000260649 CERS3Q8IU89 383 aa12.7□□□□□ -0.38
SLC3A1-201ENST00000260649 DUSP9Q99956 384 aaKnown RBP12.7□□□□□ -0.38
SLC3A1-201ENST00000260649 GUCA1BQ9UMX6 200 aa12.7□□□□□ -0.38
SLC3A1-201ENST00000260649 USP17L15C9J2P7 530 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 USP17L13C9JLJ4 530 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 USP17L11C9JVI0 530 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 USP17L18D6R9N7 530 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 USP17L22D6RA61 530 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 USP17L17D6RBQ6 530 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 USP17L19D6RCP7 530 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 USP17L20D6RJB6 530 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 LAD1O00515 517 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 PRPHP41219 470 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 MAP3K9P80192 1104 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 GABPAQ06546 454 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 USP17L24Q0WX57 530 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 GRB10Q13322 594 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 SLC27A3Q5K4L6 730 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 USP17L6PQ6QN14 398 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 SNX29Q8TEQ0 813 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 TUBGCP2Q9BSJ2 902 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 TMX4Q9H1E5 349 aaPredicted RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 AGPAT5Q9NUQ2 364 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 UBR3Q6ZT12 1888 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 LRRC10BA6NIK2 292 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 CACNB1Q02641 598 aaPredicted RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 ZNF543Q08ER8 600 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 TTI2Q6NXR4 508 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 KCNK18Q7Z418 384 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 GLIS3Q8NEA6 775 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 TEKT1Q969V4 418 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 CCDC47Q96A33 483 aaKnown RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 CNOT6LQ96LI5 555 aaKnown RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 ZHX1Q9UKY1 873 aaPredicted RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 MYMKA6NI61 221 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 EDIL3O43854 480 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 GDF11O95390 407 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 ZSCAN20P17040 1043 aaPredicted RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 TRIM21P19474 475 aaKnown RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 TBC1D8BQ0IIM8 1120 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 KCNB1Q14721 858 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 APOBEC3HQ6NTF7 200 aaKnown RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 CYP26C1Q6V0L0 522 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 SV2BQ7L1I2 683 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 P2RX5Q93086 422 aa12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 NAA15Q9BXJ9 866 aaKnown RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 LUC7L2Q9Y383 392 aaKnown RBP12.69□□□□□ -0.38
SLC3A1-201ENST00000260649 LGALS16A8MUM7 142 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 HLA-DOAP06340 250 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 CRKP46108 304 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 IKQ13123 557 aaPredicted RBP12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 ASPRV1Q53RT3 343 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 TMTC1Q8IUR5 882 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 SMAP1Q8IYB5 467 aaPredicted RBP12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 KIAA0895Q8NCT3 520 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 PNMA5Q96PV4 448 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 DDTLA6NHG4 134 aaPredicted RBP12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 APBA3O96018 575 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 H2AFXP16104 143 aaPredicted RBP12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 TMEM266Q2M3C6 531 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 AK8Q96MA6 479 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 NOC4LQ9BVI4 516 aaKnown RBP12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 BLOC1S4Q9NUP1 217 aa12.68□□□□□ -0.38
SLC3A1-201ENST00000260649 ADAMTSL1Q8N6G6 1762 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 ITIH6Q6UXX5 1313 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 EFCAB8A8MWE9 144 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 ENC1O14682 589 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 ECM1Q16610 540 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 TSR1Q2NL82 804 aaKnown RBP12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 PNMA6FA0A0J9YX94 578 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 NPR1P16066 1061 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 CCNE1P24864 410 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 USH1GQ495M9 461 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 TMCO3Q6UWJ1 677 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 LARP4BQ92615 738 aaKnown RBP12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 MTMR9Q96QG7 549 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 SEMA6BQ9H3T3 888 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 DNAJC18Q9H819 358 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 PSTPIP2Q9H939 334 aa12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 RNF216Q9NWF9 866 aaPredicted RBP12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 DDX25Q9UHL0 483 aaKnown RBP12.67□□□□□ -0.38
SLC3A1-201ENST00000260649 EEF2P13639 858 aaKnown RBP12.66□□□□□ -0.38
SLC3A1-201ENST00000260649 CHRNA5P30532 468 aa12.66□□□□□ -0.38
SLC3A1-201ENST00000260649 AMPD3Q01432 767 aa12.66□□□□□ -0.38
SLC3A1-201ENST00000260649 KRT79Q5XKE5 535 aa12.66□□□□□ -0.38
SLC3A1-201ENST00000260649 KRT222Q8N1A0 295 aa12.66□□□□□ -0.38
SLC3A1-201ENST00000260649 OR8K1Q8NGG5 319 aa12.66□□□□□ -0.38
SLC3A1-201ENST00000260649 TRIM34Q9BYJ4 488 aa12.66□□□□□ -0.38
SLC3A1-201ENST00000260649 ZHX3Q9H4I2 956 aa12.66□□□□□ -0.38
SLC3A1-201ENST00000260649 THAP9Q9H5L6 903 aa12.66□□□□□ -0.38
SLC3A1-201ENST00000260649 EPN1Q9Y6I3 576 aaPredicted RBP12.66□□□□□ -0.38
SLC3A1-201ENST00000260649 SEPT2Q15019 361 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms