RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 GPRC5AQ8NFJ5 357 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 CCDC148Q8NFR7 591 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 GMCL1Q96IK5 515 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 GOLPH3LQ9H4A5 285 aa19.97■□□□□ 0.79
SRSF1-201ENST00000258962 SLC1A4P43007 532 aa19.96■□□□□ 0.79
SRSF1-201ENST00000258962 AXDND1Q5T1B0 1012 aaPredicted RBP19.96■□□□□ 0.79
SRSF1-201ENST00000258962 ADALQ6DHV7 355 aa19.96■□□□□ 0.79
SRSF1-201ENST00000258962 CCAR1Q8IX12 1150 aaKnown RBP19.96■□□□□ 0.79
SRSF1-201ENST00000258962 MTMR8Q96EF0 704 aa19.96■□□□□ 0.79
SRSF1-201ENST00000258962 PAGR1Q9BTK6 254 aa19.96■□□□□ 0.79
SRSF1-201ENST00000258962 PCDHB6Q9Y5E3 794 aa19.96■□□□□ 0.79
SRSF1-201ENST00000258962 PPP6R2O75170 966 aa19.95■□□□□ 0.78
SRSF1-201ENST00000258962 FLOT1O75955 427 aa19.95■□□□□ 0.78
SRSF1-201ENST00000258962 GALNT17Q6IS24 598 aa19.95■□□□□ 0.78
SRSF1-201ENST00000258962 TRIM47Q96LD4 638 aa19.95■□□□□ 0.78
SRSF1-201ENST00000258962 NUP88Q99567 741 aaPredicted RBP19.95■□□□□ 0.78
SRSF1-201ENST00000258962 DACT1Q9NYF0 836 aa19.95■□□□□ 0.78
SRSF1-201ENST00000258962 RBPJLQ9UBG7 517 aa19.95■□□□□ 0.78
SRSF1-201ENST00000258962 MORF4L1Q9UBU8 362 aa19.95■□□□□ 0.78
SRSF1-201ENST00000258962 PTPN22Q9Y2R2 807 aa19.95■□□□□ 0.78
SRSF1-201ENST00000258962 RABGAP1Q9Y3P9 1069 aa19.95■□□□□ 0.78
SRSF1-201ENST00000258962 A0A1W2PQ27 194 aa19.94■□□□□ 0.78
SRSF1-201ENST00000258962 A0A1W2PQ64 194 aa19.94■□□□□ 0.78
SRSF1-201ENST00000258962 A0A1W2PQD8 194 aa19.94■□□□□ 0.78
SRSF1-201ENST00000258962 hCG_1984214I3L0E3 225 aa19.94■□□□□ 0.78
SRSF1-201ENST00000258962 WNT7AO00755 349 aa19.94■□□□□ 0.78
SRSF1-201ENST00000258962 TNPO2O14787 897 aaKnown RBP19.94■□□□□ 0.78
SRSF1-201ENST00000258962 PPP1R11O60927 126 aaPredicted RBP19.94■□□□□ 0.78
SRSF1-201ENST00000258962 NR1I2O75469 434 aa19.94■□□□□ 0.78
SRSF1-201ENST00000258962 MARCKSP29966 332 aaPredicted RBP19.94■□□□□ 0.78
SRSF1-201ENST00000258962 NAPAP54920 295 aa19.94■□□□□ 0.78
SRSF1-201ENST00000258962 PRMT2P55345 433 aa19.94■□□□□ 0.78
SRSF1-201ENST00000258962 CAP1Q01518 475 aa19.94■□□□□ 0.78
SRSF1-201ENST00000258962 SAMD1Q6SPF0 538 aaPredicted RBP19.94■□□□□ 0.78
SRSF1-201ENST00000258962 ZNF713Q8N859 430 aaPredicted RBP19.94■□□□□ 0.78
SRSF1-201ENST00000258962 ZMYND12Q9H0C1 365 aa19.94■□□□□ 0.78
SRSF1-201ENST00000258962 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.94■□□□□ 0.78
SRSF1-201ENST00000258962 PNMA6FA0A0J9YX94 578 aa19.93■□□□□ 0.78
SRSF1-201ENST00000258962 GOLGA6L3A6NEY3 463 aa19.93■□□□□ 0.78
SRSF1-201ENST00000258962 PIK3AP1Q6ZUJ8 805 aa19.93■□□□□ 0.78
SRSF1-201ENST00000258962 FSIP1Q8NA03 581 aa19.93■□□□□ 0.78
SRSF1-201ENST00000258962 RASGRP4Q8TDF6 673 aa19.93■□□□□ 0.78
SRSF1-201ENST00000258962 CCDC12Q8WUD4 166 aaPredicted RBP19.93■□□□□ 0.78
SRSF1-201ENST00000258962 COA7Q96BR5 231 aa19.93■□□□□ 0.78
SRSF1-201ENST00000258962 PCDHA6Q9UN73 950 aa19.93■□□□□ 0.78
SRSF1-201ENST00000258962 PCDHA8Q9Y5H6 950 aa19.93■□□□□ 0.78
SRSF1-201ENST00000258962 ESYT2A0FGR8 921 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 SPDYE16A6NNV3 312 aaPredicted RBP19.92■□□□□ 0.78
SRSF1-201ENST00000258962 ATP2B1P20020 1258 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 CTGFP29279 349 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 FAM83BQ5T0W9 1011 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 LRSAM1Q6UWE0 723 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 LBX2Q6XYB7 198 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 ENGASEQ8NFI3 743 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 MRPS27Q92552 414 aaKnown RBP19.92■□□□□ 0.78
SRSF1-201ENST00000258962 TXNRD2Q9NNW7 524 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 DDX19AQ9NUU7 478 aaKnown RBP19.92■□□□□ 0.78
SRSF1-201ENST00000258962 SRRDQ9UH36 339 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 NOL7Q9UMY1 257 aaKnown RBP19.92■□□□□ 0.78
SRSF1-201ENST00000258962 ZBTB5O15062 677 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 BMP3P12645 472 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 DSG3P32926 999 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 ERVK-9P63128 1117 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 ERVK-24P63145 666 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 CCNA1P78396 465 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 SNW1Q13573 536 aaKnown RBP19.92■□□□□ 0.78
SRSF1-201ENST00000258962 MB21D1Q8N884 522 aa19.92■□□□□ 0.78
SRSF1-201ENST00000258962 MORC2Q9Y6X9 1032 aaPredicted RBP19.92■□□□□ 0.78
SRSF1-201ENST00000258962 SMCO2A6NFE2 343 aa19.91■□□□□ 0.78
SRSF1-201ENST00000258962 PEX10O60683 326 aa19.91■□□□□ 0.78
SRSF1-201ENST00000258962 TTC38Q5R3I4 469 aa19.91■□□□□ 0.78
SRSF1-201ENST00000258962 CCDC73Q6ZRK6 1079 aa19.91■□□□□ 0.78
SRSF1-201ENST00000258962 NUP62CLQ9H1M0 184 aa19.91■□□□□ 0.78
SRSF1-201ENST00000258962 CLSTN2Q9H4D0 955 aa19.91■□□□□ 0.78
SRSF1-201ENST00000258962 C6orf50Q9HD87 102 aa19.91■□□□□ 0.78
SRSF1-201ENST00000258962 FBXO2Q9UK22 296 aaPredicted RBP19.91■□□□□ 0.78
SRSF1-201ENST00000258962 MYPNQ86TC9 1320 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 CCDC85CA6NKD9 419 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 MAPK4P31152 587 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 TRAPPC10P48553 1259 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 FAM160A1Q05DH4 1040 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 QRICH1Q2TAL8 776 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 Q3C1V9 767 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 PPP1R18Q6NYC8 613 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 BTNL9Q6UXG8 535 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 FMR1NBQ8N0W7 255 aaPredicted RBP19.9■□□□□ 0.78
SRSF1-201ENST00000258962 RAET1EQ8TD07 263 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 CLIC6Q96NY7 704 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 CEP131Q9UPN4 1083 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 MRVI1Q9Y6F6 885 aa19.9■□□□□ 0.78
SRSF1-201ENST00000258962 A0A1B0GVL5 298 aa19.89■□□□□ 0.77
SRSF1-201ENST00000258962 CUTAO60888 179 aa19.89■□□□□ 0.77
SRSF1-201ENST00000258962 CAPN15O75808 1086 aa19.89■□□□□ 0.77
SRSF1-201ENST00000258962 LETM1O95202 739 aaPredicted RBP19.89■□□□□ 0.77
SRSF1-201ENST00000258962 PTPREP23469 700 aa19.89■□□□□ 0.77
SRSF1-201ENST00000258962 CMA1P23946 247 aa19.89■□□□□ 0.77
SRSF1-201ENST00000258962 CDC37Q16543 378 aaPredicted RBP19.89■□□□□ 0.77
SRSF1-201ENST00000258962 SYDE2Q5VT97 1194 aa19.89■□□□□ 0.77
SRSF1-201ENST00000258962 SHC4Q6S5L8 630 aa19.89■□□□□ 0.77
SRSF1-201ENST00000258962 POTEEQ6S8J3 1075 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 480.5 ms