RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PDXDC2PQ6P474 469 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 ANKS1AQ92625 1134 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 PKD2L1Q9P0L9 805 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 ECM29Q5VYK3 1845 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 PPP1R3GB7ZBB8 358 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 STAT3P40763 770 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 PMS1P54277 932 aaKnown RBP16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 FILIP1LQ4L180 1135 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 HHIPL2Q6UWX4 724 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 CCDC150Q8NCX0 1101 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 ENOX1Q8TC92 643 aaKnown RBP16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 CALML4Q96GE6 196 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 SRRTQ9BXP5 876 aaKnown RBP16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 TMEM39BQ9GZU3 492 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 DLGAP5Q15398 846 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 E2F4Q16254 413 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 NAALADL2Q58DX5 795 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 SPECC1LQ69YQ0 1117 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 MNS1Q8NEH6 495 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 KIFC2Q96AC6 838 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 GSDMAQ96QA5 445 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 SH3GLB2Q9NR46 395 aa16.42■□□□□ 0.22
TRAFD1-201ENST00000257604 LY75O60449 1722 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 GTPBP6O43824 516 aaPredicted RBP16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 CDC37Q16543 378 aaPredicted RBP16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 ASPRV1Q53RT3 343 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 TEX35Q5T0J7 233 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 SPATA1Q5VX52 437 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 TTLL6Q8N841 843 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 BAG1Q99933 345 aaPredicted RBP16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 UBXN1Q04323 297 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 RBL2Q08999 1139 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 EXOC1Q9NV70 894 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 FZD1Q9UP38 647 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 FHOD1Q9Y613 1164 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 COL24A1Q17RW2 1714 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 ROBO3Q96MS0 1386 aa16.41■□□□□ 0.22
TRAFD1-201ENST00000257604 SOWAHDA6NJG2 315 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 MEIS1O00470 390 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 CFBP00751 764 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 CASP14P31944 242 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 PRR16Q569H4 304 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 PRAMEF18Q5VWM3 479 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 ZDHHC15Q96MV8 337 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 IRX2Q9BZI1 471 aaPredicted RBP16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 GJA3Q9Y6H8 435 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 PNMA6FA0A0J9YX94 578 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 RRP1BQ14684 758 aaKnown RBP16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 UBXN4Q92575 508 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 CUL5Q93034 780 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 DDX25Q9UHL0 483 aaKnown RBP16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 A0A0U1RQJ8 604 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 FANCGO15287 622 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 CHMP2AO43633 222 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 ZNF76P36508 570 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 CYP4A11Q02928 519 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 DGKZQ13574 1117 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 TOGARAM2Q6ZUX3 1019 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 ATRIPQ8WXE1 791 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 TMEM51Q9NW97 253 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 SWAP70Q9UH65 585 aa16.4■□□□□ 0.22
TRAFD1-201ENST00000257604 PNMA6AP0CW24 399 aaPredicted RBP16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 IRX5P78411 483 aaPredicted RBP16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 STK4Q13043 487 aa16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 TMEM266Q2M3C6 531 aa16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 ARL6IP4Q66PJ3 421 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 RIOX1Q9H6W3 641 aa16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 KANSL2Q9H9L4 492 aa16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 IMPACTQ9P2X3 320 aa16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 ZBTB5O15062 677 aa16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 TFRCP02786 760 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 KRT18P05783 430 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 MRPL12P52815 198 aaKnown RBP16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 KRT31Q15323 416 aa16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 HOMER2Q9NSB8 354 aa16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 RGS17Q9UGC6 210 aaPredicted RBP16.39■□□□□ 0.21
TRAFD1-201ENST00000257604 M0R2N6 131 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 NDUFB10O96000 172 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 H2AFXP16104 143 aaPredicted RBP16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 PRKG1Q13976 671 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 ANKRD20A12PQ8NF67 263 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 KCNJ18B7U540 433 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 KCNJ12Q14500 433 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 NBPF9Q3BBW0 867 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 SH3RF1Q7Z6J0 888 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 TRIML1Q8N9V2 468 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 TBC1D5Q92609 795 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 L2HGDHQ9H9P8 463 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 BCS1LQ9Y276 419 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 NPHP3-ACAD11A0A0J9YXS1 232 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 A0A1W2PRG0 241 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 CCDC66A2RUB6 948 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 PLA2G4AP47712 749 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 GNG11P61952 73 aa16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 ENOX2Q16206 610 aaKnown RBP16.38■□□□□ 0.21
TRAFD1-201ENST00000257604 KRT79Q5XKE5 535 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms