RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 TFRCP02786 760 aaKnown RBP18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 TNNI2P48788 182 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 KLK7P49862 253 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 CACNB3P54284 484 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 GRB10Q13322 594 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 KCTD1Q719H9 257 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 KRT27Q7Z3Y8 459 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 ZNF507Q8TCN5 953 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 C7orf25Q9BPX7 421 aa18.54■□□□□ 0.56
UBQLN1-201ENST00000257468 KIF5CO60282 957 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 EEF1GP26641 437 aaKnown RBP18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 ZNF543Q08ER8 600 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 MCM6Q14566 821 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 CYP26C1Q6V0L0 522 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 KIAA0895Q8NCT3 520 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 P2RX5Q93086 422 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 UIMC1Q96RL1 719 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 NUDT12Q9BQG2 462 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 BLOC1S4Q9NUP1 217 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 LRWD1Q9UFC0 647 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 QSER1Q2KHR3 1735 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 TRIM14Q14142 442 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 SLC35F6Q8N357 371 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 PNMA5Q96PV4 448 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 MAGEF1Q9HAY2 307 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 SLC39A2Q9NP94 309 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 ST7Q9NRC1 585 aa18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 MAGEC2Q9UBF1 373 aaPredicted RBP18.53■□□□□ 0.56
UBQLN1-201ENST00000257468 SEC31AO94979 1220 aaKnown RBP18.52■□□□□ 0.56
UBQLN1-201ENST00000257468 CCDC96Q2M329 555 aa18.52■□□□□ 0.56
UBQLN1-201ENST00000257468 APOBEC3HQ6NTF7 200 aaKnown RBP18.52■□□□□ 0.56
UBQLN1-201ENST00000257468 CALML4Q96GE6 196 aa18.52■□□□□ 0.56
UBQLN1-201ENST00000257468 DHTKD1Q96HY7 919 aaPredicted RBP18.52■□□□□ 0.56
UBQLN1-201ENST00000257468 TUBGCP2Q9BSJ2 902 aa18.52■□□□□ 0.56
UBQLN1-201ENST00000257468 DBNDD1Q9H9R9 158 aa18.52■□□□□ 0.56
UBQLN1-201ENST00000257468 USP17L10C9JJH3 530 aa18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 RAD21O60216 631 aa18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 CCNE1P24864 410 aa18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 ARHGAP25P42331 645 aa18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 DYMQ7RTS9 669 aa18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 TMC4Q7Z404 712 aa18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 CNOT6LQ96LI5 555 aaKnown RBP18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 FAM53CQ9NYF3 392 aa18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 TRIM10Q9UDY6 481 aa18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 TFR2Q9UP52 801 aa18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 REXO2Q9Y3B8 237 aaKnown RBP18.52■□□□□ 0.55
UBQLN1-201ENST00000257468 COL11A2P13942 1736 aaPredicted RBP18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 MYMKA6NI61 221 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 TCP10Q12799 353 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 RSRC2Q7L4I2 434 aaKnown RBP18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 COL23A1Q86Y22 540 aaPredicted RBP18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 KRT222Q8N1A0 295 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 FHOD1Q9Y613 1164 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 NRXN2Q9P2S2 1712 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 MYH4Q9Y623 1939 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 hCG_1984214I3L0E3 225 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 HMGB2P26583 209 aaKnown RBP18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 KCNK18Q7Z418 384 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 ZNF713Q8N859 430 aaPredicted RBP18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 DNAJC18Q9H819 358 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 AGPAT5Q9NUQ2 364 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 PUF60Q9UHX1 559 aaKnown RBP18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 SUGT1Q9Y2Z0 365 aa18.51■□□□□ 0.55
UBQLN1-201ENST00000257468 PNMA6FA0A0J9YX94 578 aa18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 RASSF10A6NK89 507 aa18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 G3V3G9 751 aa18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 DMTNQ08495 405 aa18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 DCAF8Q5TAQ9 597 aa18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 WDR59Q6PJI9 974 aa18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 SV2BQ7L1I2 683 aa18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 TEKT1Q969V4 418 aa18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 CCDC47Q96A33 483 aaKnown RBP18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 SEMA6BQ9H3T3 888 aa18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 LUC7L2Q9Y383 392 aaKnown RBP18.5■□□□□ 0.55
UBQLN1-201ENST00000257468 A0A1W2PQC6 194 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 NPR1P16066 1061 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 FXR2P51116 673 aaKnown RBP eCLIP18.49■□□□□ 0.554e-9■□□□□ 10.8
UBQLN1-201ENST00000257468 MSL1Q68DK7 614 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 OR8K1Q8NGG5 319 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 RIC8AQ9NPQ8 531 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 SWAP70Q9UH65 585 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 NDUFA10O95299 355 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 AMPD3Q01432 767 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 ECM1Q16610 540 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 KIAA0825Q8IV33 1275 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 SNX29Q8TEQ0 813 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 LARP4BQ92615 738 aaKnown RBP18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 CDK5RAP3Q96JB5 506 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 DNAJC7Q99615 494 aa18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 EPN1Q9Y6I3 576 aaPredicted RBP18.49■□□□□ 0.55
UBQLN1-201ENST00000257468 PNMA6AP0CW24 399 aaPredicted RBP18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 CRKP46108 304 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 MTIF2P46199 727 aaKnown RBP18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 DNM2P50570 870 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 TMEM266Q2M3C6 531 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 KIF4BQ2VIQ3 1234 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 MIIPQ5JXC2 388 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 GLIS3Q8NEA6 775 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 CAPN11Q9UMQ6 739 aa18.48■□□□□ 0.55
UBQLN1-201ENST00000257468 MYH7BA7E2Y1 1941 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms