RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ECM2O94769 699 aaPredicted RBP14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 ENOX2Q16206 610 aaKnown RBP14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 GGA3Q9NZ52 723 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 YY1P25490 414 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 ADORA1P30542 326 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 CIITAP33076 1130 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 KCNH3Q9ULD8 1083 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 PALD1Q9ULE6 856 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 NKRFO15226 690 aaKnown RBP eCLIP14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 KRT86O43790 486 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 KCNQ4P56696 695 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 TNNC1P63316 161 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 SNRNP48Q6IEG0 339 aaKnown RBP14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 NOSTRINQ8IVI9 506 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 TRERF1Q96PN7 1200 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 DPP7Q9UHL4 492 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 NR2E3Q9Y5X4 410 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 ZBTB5O15062 677 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 GYS1P13807 737 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 GTF3C6Q969F1 213 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 PKNOX2Q96KN3 472 aa14.84□□□□□ -0.03
PRPF38A-201ENST00000257181 MACROD2A1Z1Q3 448 aa14.83□□□□□ -0.03
PRPF38A-201ENST00000257181 RARBP10826 455 aa14.83□□□□□ -0.03
PRPF38A-201ENST00000257181 CPT1AP50416 773 aa14.83□□□□□ -0.03
PRPF38A-201ENST00000257181 UBASH3AP57075 661 aa14.83□□□□□ -0.03
PRPF38A-201ENST00000257181 RABL6Q3YEC7 729 aaPredicted RBP14.83□□□□□ -0.03
PRPF38A-201ENST00000257181 SBK1Q52WX2 424 aa14.83□□□□□ -0.03
PRPF38A-201ENST00000257181 ARMCX2Q7L311 632 aa14.83□□□□□ -0.03
PRPF38A-201ENST00000257181 ZC3H15Q8WU90 426 aaKnown RBP14.83□□□□□ -0.03
PRPF38A-201ENST00000257181 TRIM11Q96F44 468 aa14.83□□□□□ -0.03
PRPF38A-201ENST00000257181 TEX13BQ9BXU2 312 aa14.83□□□□□ -0.03
PRPF38A-201ENST00000257181 KIAA0391O15091 583 aaKnown RBP14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 EP400NLQ6ZTU2 488 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 SCYL3Q8IZE3 742 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 NLRP7Q8WX94 980 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 C1orf112Q9NSG2 853 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 RNF146Q9NTX7 359 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 MAFGO15525 162 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 ZNF449Q6P9G9 518 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 GPBP1Q86WP2 473 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 LDHDQ86WU2 507 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 FAM178BQ8IXR5 827 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 HOXA2O43364 376 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 CSF1RP07333 972 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 TNNI1P19237 187 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 SEL1L2Q5TEA6 688 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 ARMCX5Q6P1M9 558 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 FAM43AQ8N2R8 423 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 MROH8Q9H579 483 aa14.83□□□□□ -0.04
PRPF38A-201ENST00000257181 K7ENM7 598 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 KRT19P08727 400 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 MIGA2Q7L4E1 593 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 FAM20AQ96MK3 541 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 ELP3Q9H9T3 547 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 WDR64B1ANS9 1081 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 CXCL11O14625 94 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 OATP04181 439 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 PAK1Q13153 545 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 RASA3Q14644 834 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 DCAF17Q5H9S7 520 aaPredicted RBP14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 ANGEL2Q5VTE6 544 aaKnown RBP14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 PCSK9Q8NBP7 692 aaKnown RBP14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 SOCS4Q8WXH5 440 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 PANK2Q9BZ23 570 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 PSMD14O00487 310 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 FKBP1CQ5VVH2 108 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 HAUS1Q96CS2 278 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 CCDC42Q96M95 316 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 PSMD2Q13200 908 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 KLHL40Q2TBA0 621 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 MYOCDQ8IZQ8 938 aa14.82□□□□□ -0.04
PRPF38A-201ENST00000257181 DEFB132Q7Z7B7 95 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 RNF169Q8NCN4 708 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 GCOM2Q9BZD3 368 aaPredicted RBP14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 SNX25Q9H3E2 840 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 SUGCTQ9HAC7 445 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 CWC15Q9P013 229 aaKnown RBP14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 MED7O43513 233 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 NKX2-3Q8TAU0 364 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 NOC4LQ9BVI4 516 aaKnown RBP14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 FAM184BQ9ULE4 1060 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 UBR1Q8IWV7 1749 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 CA12O43570 354 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 GH1P01241 217 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 SUPT20HL2P0C7V6 817 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 TUBB2AQ13885 445 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 DPH6Q7L8W6 267 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 PLCD3Q8N3E9 789 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 TUBB2BQ9BVA1 445 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 ZSWIM4Q9H7M6 989 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 CEMIPQ8WUJ3 1361 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 LRRIQ4A6NIV6 560 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 SMARCA1P28370 1054 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 KIF5AQ12840 1032 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 SYCE1Q8N0S2 351 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 LCORLQ8N3X6 602 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 MAP4K1Q92918 833 aa14.81□□□□□ -0.04
PRPF38A-201ENST00000257181 ZMYND15Q9H091 742 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms