RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 KCNB1Q14721 858 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 ALS2CLQ60I27 953 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 RAD9BQ6WBX8 426 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 TRIM58Q8NG06 486 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 TMEM174Q8WUU8 243 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 DNAJC7Q99615 494 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 MRPL44Q9H9J2 332 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 ATF5Q9Y2D1 282 aaPredicted RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 SAR1BQ9Y6B6 198 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 GOLGB1Q14789 3259 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 ZSWIM8A7E2V4 1837 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 FRMD3A2A2Y4 597 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 GOLGA6CA6NDK9 693 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 EIF4E1BA6NMX2 242 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 TOM1O60784 492 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 PPP1R11O60927 126 aaPredicted RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 RPS6KA5O75582 802 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 IDH1O75874 414 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 GOLGA6DP0CG33 693 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 CYP2D6P10635 497 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 DNM2P50570 870 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 DDR1Q08345 913 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 KARSQ15046 597 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 SIAH1Q8IUQ4 282 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 OTUD6BQ8N6M0 293 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 ARHGEF1Q92888 912 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 CDK5RAP3Q96JB5 506 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 CCSER1Q9C0I3 900 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 STMN4Q9H169 189 aaPredicted RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 DNAJC18Q9H819 358 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 GOLGA6AQ9NYA3 693 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 ADAM21Q9UKJ8 722 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 TMCO5BA8MYB1 307 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 GTPBP6O43824 516 aaPredicted RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 EPS15P42566 896 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 NAP1L1P55209 391 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 ERVK-24P63145 666 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 PPP2R5EQ16537 467 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 GLE1Q53GS7 698 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 GALNT17Q6IS24 598 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 TTI2Q6NXR4 508 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 SMIM5Q71RC9 77 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 IFT20Q8IY31 132 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 EPSTI1Q96J88 318 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 PCDHA6Q9UN73 950 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 PCDHA8Q9Y5H6 950 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 GOLGA6BA6NDN3 693 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 MYO1CO00159 1063 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 PMS1P54277 932 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 TNNC1P63316 161 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 IRX5P78411 483 aaPredicted RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 SPIRE1Q08AE8 756 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 RAD51AP2Q09MP3 1159 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 PAK2Q13177 524 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 NFIXQ14938 502 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 ZRSR2Q15696 482 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 KLHL10Q6JEL2 608 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 RAB11FIP4Q86YS3 637 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 ADSSL1Q8N142 457 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 MSANTD4Q8NCY6 345 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 LMBR1Q8WVP7 490 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 ZNF219Q9P2Y4 722 aaPredicted RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 ARPP21Q9UBL0 812 aaPredicted RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 SERTAD1Q9UHV2 236 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 NIP7Q9Y221 180 aaKnown RBP eCLIP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 SLC4A4Q9Y6R1 1079 aa4.62□□□□□ -1.67
UBE4A-201ENST00000252108 BAZ2BQ9UIF8 2168 aaKnown RBP4.62□□□□□ -1.67
UBE4A-201ENST00000252108 POLRMTO00411 1230 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 SASH3O75995 380 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 GYS1P13807 737 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 INPP5BP32019 993 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 VWA3BQ502W6 1294 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 ICE2Q659A1 982 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 RUFY4Q6ZNE9 571 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CCDC84Q86UT8 332 aaPredicted RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 GRAMD1CQ8IYS0 662 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 NUP133Q8WUM0 1156 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 AKT1S1Q96B36 256 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 WDR24Q96S15 920 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 SELENOOQ9BVL4 669 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 LZTFL1Q9NQ48 299 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 COL11A1P12107 1806 aaPredicted RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 TEX33O43247 280 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 RHOBTB3O94955 611 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 IGHMBP2P38935 993 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 MTIF2P46199 727 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 MNAT1P51948 309 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 RBM5P52756 815 aaKnown RBP eCLIP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 ORC2Q13416 577 aaPredicted RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 MTMR3Q13615 1198 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 CCDC122Q5T0U0 273 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 GIMAP8Q8ND71 665 aaPredicted RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 DDX12PQ92771 950 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 P3H4Q92791 437 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 LRRC45Q96CN5 670 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 TRIM47Q96LD4 638 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 NAP1L4Q99733 375 aaKnown RBP4.61□□□□□ -1.67
UBE4A-201ENST00000252108 SWAP70Q9UH65 585 aa4.61□□□□□ -1.67
UBE4A-201ENST00000252108 SRP68Q9UHB9 627 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms