RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 MROH7Q68CQ1 1323 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 A0A0D9SFI3 127 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 DCDC2CA8MYV0 355 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 C6orf222P0C671 652 aaPredicted RBP12.21□□□□□ -0.45
VPS50-201ENST00000251739 SLC4A3P48751 1232 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 PDE1AP54750 535 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 BTNL9Q6UXG8 535 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 KCTD1Q719H9 257 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 SLC43A3Q8NBI5 491 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 MORC4Q8TE76 937 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.452e-7■■■■□ 23.4
VPS50-201ENST00000251739 EVI5LQ96CN4 794 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 GLT1D1Q96MS3 346 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 HELLSQ9NRZ9 838 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 TMEM39AQ9NV64 488 aa12.21□□□□□ -0.45
VPS50-201ENST00000251739 GNEQ9Y223 722 aaKnown RBP12.21□□□□□ -0.45
VPS50-201ENST00000251739 BDP1A6H8Y1 2624 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 MYH6P13533 1939 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 A0A0U1RQG5 324 aaPredicted RBP12.2□□□□□ -0.46
VPS50-201ENST00000251739 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.2□□□□□ -0.46
VPS50-201ENST00000251739 TSPY2A6NKD2 308 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 TIMP1P01033 207 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 MUM1L1Q5H9M0 696 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
VPS50-201ENST00000251739 RASIP1Q5U651 963 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 MFSD5Q6N075 450 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.2□□□□□ -0.46
VPS50-201ENST00000251739 FAM126BQ8IXS8 530 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 DCAF4Q8WV16 495 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 RNPC3Q96LT9 517 aaKnown RBP12.2□□□□□ -0.46
VPS50-201ENST00000251739 TRERF1Q96PN7 1200 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 RANBP17Q9H2T7 1088 aaKnown RBP12.2□□□□□ -0.46
VPS50-201ENST00000251739 CYP39A1Q9NYL5 469 aa12.2□□□□□ -0.46
VPS50-201ENST00000251739 MUC3AQ02505 3323 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 ASB14A6NK59 587 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 ARVCFO00192 962 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 CD4P01730 458 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 ICAM1P05362 532 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 ALAS1P13196 640 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 GNASQ5JWF2 1037 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 ANKRD45Q5TZF3 282 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 C16orf59Q7L2K0 433 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 FAM227BQ96M60 508 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 CRBNQ96SW2 442 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 SPC25Q9HBM1 224 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 TCP11L1Q9NUJ3 509 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 DDX49Q9Y6V7 483 aaKnown RBP12.19□□□□□ -0.46
VPS50-201ENST00000251739 TANC1Q9C0D5 1861 aa12.19□□□□□ -0.46
VPS50-201ENST00000251739 GRIN2DO15399 1336 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 KIAA1217Q5T5P2 1943 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 RANBP6O60518 1105 aaKnown RBP12.18□□□□□ -0.46
VPS50-201ENST00000251739 FGAP02671 866 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 NUDT7P0C024 238 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 PTGS1P23219 599 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 SNAP25P60880 206 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 BEX3Q00994 111 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 TNFAIP2Q03169 654 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 IKQ13123 557 aaPredicted RBP12.18□□□□□ -0.46
VPS50-201ENST00000251739 TAPT1Q6NXT6 567 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 CCDC174Q6PII3 467 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 TLK2Q86UE8 772 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 ZNF589Q86UQ0 364 aaPredicted RBP12.18□□□□□ -0.46
VPS50-201ENST00000251739 TMEM47Q9BQJ4 181 aa12.18□□□□□ -0.46
VPS50-201ENST00000251739 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.18□□□□□ -0.46
VPS50-201ENST00000251739 COL25A1Q9BXS0 654 aaPredicted RBP12.18□□□□□ -0.46
VPS50-201ENST00000251739 SCN5AQ14524 2016 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 LOC102724159A0A0B4J2E5 919 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 CABYRO75952 493 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 SNHG28P0DPA3 235 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
VPS50-201ENST00000251739 TOP1P11387 765 aaKnown RBP12.17□□□□□ -0.46
VPS50-201ENST00000251739 SMPD1P17405 629 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 DNAJB2P25686 324 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 NMIQ13287 307 aaPredicted RBP12.17□□□□□ -0.46
VPS50-201ENST00000251739 PPIGQ13427 754 aaKnown RBP eCLIP12.17□□□□□ -0.46
VPS50-201ENST00000251739 PWP2Q15269 919 aaKnown RBP12.17□□□□□ -0.46
VPS50-201ENST00000251739 FSCN1Q16658 493 aaKnown RBP12.17□□□□□ -0.46
VPS50-201ENST00000251739 MCMDC2Q4G0Z9 681 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 TMEM240Q5SV17 173 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 TMEM63BQ5T3F8 832 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 TTBK2Q6IQ55 1244 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 FBXO16Q8IX29 292 aaPredicted RBP12.17□□□□□ -0.46
VPS50-201ENST00000251739 SMC5Q8IY18 1101 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 MAFAQ8NHW3 353 aaPredicted RBP12.17□□□□□ -0.46
VPS50-201ENST00000251739 MYLIPQ8WY64 445 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 CHMP4CQ96CF2 233 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 VTA1Q9NP79 307 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 PDGFCQ9NRA1 345 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 CCPG1Q9ULG6 757 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 ISY1Q9ULR0 285 aaKnown RBP12.17□□□□□ -0.46
VPS50-201ENST00000251739 Q9Y3F1 56 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 REV3LO60673 3130 aa12.17□□□□□ -0.46
VPS50-201ENST00000251739 CCDC171Q6TFL3 1326 aa12.16□□□□□ -0.46
VPS50-201ENST00000251739 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.16□□□□□ -0.46
VPS50-201ENST00000251739 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.16□□□□□ -0.46
VPS50-201ENST00000251739 NFIBO00712 420 aa12.16□□□□□ -0.46
VPS50-201ENST00000251739 PDHBP11177 359 aa12.16□□□□□ -0.46
VPS50-201ENST00000251739 CSF2RAP15509 400 aa12.16□□□□□ -0.46
VPS50-201ENST00000251739 CCDC96Q2M329 555 aa12.16□□□□□ -0.46
VPS50-201ENST00000251739 SYDE2Q5VT97 1194 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms