RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 C12orf60Q5U649 245 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 TAPT1Q6NXT6 567 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 RAD9AQ99638 391 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 ACAD9Q9H845 621 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 A1CFQ9NQ94 594 aaKnown RBP14.36□□□□□ -0.11
RFPL3-201ENST00000249007 ATP8A2Q9NTI2 1148 aa14.36□□□□□ -0.11
RFPL3-201ENST00000249007 GVINP1Q7Z2Y8 2422 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 GJB5O95377 273 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 CT47B1P0C2W7 299 aaPredicted RBP14.35□□□□□ -0.11
RFPL3-201ENST00000249007 IRS1P35568 1242 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 DEFB103AP81534 67 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 TTF1Q15361 905 aaPredicted RBP14.35□□□□□ -0.11
RFPL3-201ENST00000249007 IER5LQ5T953 404 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 EP400NLQ6ZTU2 488 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 ARHGAP45Q92619 1136 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 CRBNQ96SW2 442 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 PRRX2Q99811 253 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 ARMT1Q9H993 441 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 GPHNQ9NQX3 736 aaPredicted RBP14.35□□□□□ -0.11
RFPL3-201ENST00000249007 MUTYHQ9UIF7 546 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 NOD1Q9Y239 953 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 TRIP12Q14669 1992 aaPredicted RBP14.35□□□□□ -0.11
RFPL3-201ENST00000249007 SCN10AQ9Y5Y9 1956 aa14.35□□□□□ -0.11
RFPL3-201ENST00000249007 PRKAB2O43741 272 aa14.34□□□□□ -0.11
RFPL3-201ENST00000249007 MYL3P08590 195 aa14.34□□□□□ -0.11
RFPL3-201ENST00000249007 CPT1AP50416 773 aa14.34□□□□□ -0.11
RFPL3-201ENST00000249007 LRRFIP1Q32MZ4 808 aaKnown RBP14.34□□□□□ -0.11
RFPL3-201ENST00000249007 NBPF20Q3BBV1 942 aa14.34□□□□□ -0.11
RFPL3-201ENST00000249007 KIAA1211Q6ZU35 1233 aa14.34□□□□□ -0.11
RFPL3-201ENST00000249007 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
RFPL3-201ENST00000249007 SSH3Q8TE77 659 aa14.34□□□□□ -0.11
RFPL3-201ENST00000249007 MRPL38Q96DV4 380 aaKnown RBP14.34□□□□□ -0.11
RFPL3-201ENST00000249007 MTG1Q9BT17 334 aaPredicted RBP14.34□□□□□ -0.11
RFPL3-201ENST00000249007 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.34□□□□□ -0.11
RFPL3-201ENST00000249007 CTNNA3Q9UI47 895 aa14.34□□□□□ -0.11
RFPL3-201ENST00000249007 DMDP11532 3685 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 TCRBV5S4A2TA0A5A2 114 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 DEKP35659 375 aaKnown RBP14.33□□□□□ -0.12
RFPL3-201ENST00000249007 PTPROQ16827 1216 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 DUSP28Q4G0W2 176 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 TIGD5Q53EQ6 642 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 HERC4Q5GLZ8 1057 aaPredicted RBP14.33□□□□□ -0.12
RFPL3-201ENST00000249007 NFRKBQ6P4R8 1299 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 PPP1R13LQ8WUF5 828 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 PABPC5Q96DU9 382 aaKnown RBP14.33□□□□□ -0.12
RFPL3-201ENST00000249007 VTA1Q9NP79 307 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 RNF146Q9NTX7 359 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 FEM1BQ9UK73 627 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 CACNA1GO43497 2377 aa14.33□□□□□ -0.12
RFPL3-201ENST00000249007 BCAR3O75815 825 aa14.32□□□□□ -0.12
RFPL3-201ENST00000249007 TCF15Q12870 199 aa14.32□□□□□ -0.12
RFPL3-201ENST00000249007 DDRGK1Q96HY6 314 aa14.32□□□□□ -0.12
RFPL3-201ENST00000249007 C17orf80Q9BSJ5 609 aa14.32□□□□□ -0.12
RFPL3-201ENST00000249007 NYAP2Q9P242 653 aa14.32□□□□□ -0.12
RFPL3-201ENST00000249007 MBD4O95243 580 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 PKN1Q16512 942 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 FAM117BQ6P1L5 589 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 CNKSR3Q6P9H4 555 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 BMP8AQ7Z5Y6 402 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 SUGP1Q8IWZ8 645 aaKnown RBP14.31□□□□□ -0.12
RFPL3-201ENST00000249007 CCDC155Q8N6L0 562 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 BANK1Q8NDB2 785 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 AFAP1L1Q8TED9 768 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 POP1Q99575 1024 aaKnown RBP14.31□□□□□ -0.12
RFPL3-201ENST00000249007 NOP58Q9Y2X3 529 aaKnown RBP14.31□□□□□ -0.12
RFPL3-201ENST00000249007 GREB1LQ9C091 1923 aaPredicted RBP14.31□□□□□ -0.12
RFPL3-201ENST00000249007 PTPN11Q06124 597 aaPredicted RBP14.31□□□□□ -0.12
RFPL3-201ENST00000249007 BRDTQ58F21 947 aaPredicted RBP14.31□□□□□ -0.12
RFPL3-201ENST00000249007 AACSQ86V21 672 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 RNF135Q8IUD6 432 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 CAGE1Q8TC20 777 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 EDAQ92838 391 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 PBXIP1Q96AQ6 731 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 WDR11Q9BZH6 1224 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 FAM86C1Q9NVL1 165 aa14.31□□□□□ -0.12
RFPL3-201ENST00000249007 TPRP12270 2363 aaKnown RBP14.3□□□□□ -0.12
RFPL3-201ENST00000249007 ABHD14A-ACY1A0A1B0GW23 586 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 GOLIM4O00461 696 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 ANP32CO43423 234 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 FDX1P10109 184 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 RARSP54136 660 aaKnown RBP14.3□□□□□ -0.12
RFPL3-201ENST00000249007 ATP8B2P98198 1209 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 GPNMBQ14956 572 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 COL19A1Q14993 1142 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 TCEAL5Q5H9L2 206 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 OR6J1Q8NGC5 347 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 CLDND1Q9NY35 253 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 CLIP2Q9UDT6 1046 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 INSL6Q9Y581 213 aa14.3□□□□□ -0.12
RFPL3-201ENST00000249007 MYH4Q9Y623 1939 aa14.29□□□□□ -0.12
RFPL3-201ENST00000249007 RAD50Q92878 1312 aa14.29□□□□□ -0.12
RFPL3-201ENST00000249007 TMEM221A6NGB7 291 aa14.29□□□□□ -0.12
RFPL3-201ENST00000249007 M0R296 226 aa14.29□□□□□ -0.12
RFPL3-201ENST00000249007 EFCAB14O75071 495 aa14.29□□□□□ -0.12
RFPL3-201ENST00000249007 TRIM27P14373 513 aa14.29□□□□□ -0.12
RFPL3-201ENST00000249007 SELPP16109 830 aa14.29□□□□□ -0.12
RFPL3-201ENST00000249007 SMAD2Q15796 467 aaKnown RBP14.29□□□□□ -0.12
RFPL3-201ENST00000249007 PTGISQ16647 500 aa14.29□□□□□ -0.12
RFPL3-201ENST00000249007 LRRC8DQ7L1W4 858 aa14.29□□□□□ -0.12
RFPL3-201ENST00000249007 TRERF1Q96PN7 1200 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms