RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 NOC4LQ9BVI4 516 aaKnown RBP28.57■■■□□ 2.16
RAB40C-201ENST00000248139 SEMA6BQ9H3T3 888 aa28.57■■■□□ 2.16
RAB40C-201ENST00000248139 PLEKP08567 350 aaPredicted RBP28.57■■■□□ 2.16
RAB40C-201ENST00000248139 CCNE1P24864 410 aa28.57■■■□□ 2.16
RAB40C-201ENST00000248139 DNM2P50570 870 aa28.57■■■□□ 2.16
RAB40C-201ENST00000248139 GLIS3Q8NEA6 775 aa28.57■■■□□ 2.16
RAB40C-201ENST00000248139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.56■■■□□ 2.16
RAB40C-201ENST00000248139 A0A1W2PQC6 194 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 LAD1O00515 517 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 GNA11P29992 359 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 DHTKD1Q96HY7 919 aaPredicted RBP28.56■■■□□ 2.16
RAB40C-201ENST00000248139 HINFPQ9BQA5 517 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 PDE11AQ9HCR9 933 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 GGA1Q9UJY5 639 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 C6orf229H3BNL8 230 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 EDIL3O43854 480 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 N4BP1O75113 896 aaKnown RBP28.56■■■□□ 2.16
RAB40C-201ENST00000248139 CYP2C19P33261 490 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 MIIPQ5JXC2 388 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 KRT26Q7Z3Y9 468 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 LZTS2Q9BRK4 669 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 MXD3Q9BW11 206 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 DDX60LQ5H9U9 1706 aaKnown RBP28.56■■■□□ 2.16
RAB40C-201ENST00000248139 ATP2B2Q01814 1243 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 KIAA1328Q86T90 577 aa28.56■■■□□ 2.16
RAB40C-201ENST00000248139 ZKSCAN7Q9P0L1 754 aaPredicted RBP28.56■■■□□ 2.16
RAB40C-201ENST00000248139 MYMKA6NI61 221 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 ATP8B1O43520 1251 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 GRB10Q13322 594 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 BRD3Q15059 726 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 UBE2SQ16763 222 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 TTYH3Q9C0H2 523 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 EPHB6O15197 1021 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 RGL2O15211 777 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 PDHBP11177 359 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 GTF2IP78347 998 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 LRRC41Q15345 812 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 C7orf25Q9BPX7 421 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 NHEJ1Q9H9Q4 299 aaPredicted RBP28.55■■■□□ 2.16
RAB40C-201ENST00000248139 ZNF287Q9HBT7 754 aa28.55■■■□□ 2.16
RAB40C-201ENST00000248139 TMED8Q6PL24 325 aaPredicted RBP28.54■■■□□ 2.16
RAB40C-201ENST00000248139 AK8Q96MA6 479 aa28.54■■■□□ 2.16
RAB40C-201ENST00000248139 BLOC1S4Q9NUP1 217 aa28.54■■■□□ 2.16
RAB40C-201ENST00000248139 LRWD1Q9UFC0 647 aa28.54■■■□□ 2.16
RAB40C-201ENST00000248139 MYH1P12882 1939 aa28.54■■■□□ 2.16
RAB40C-201ENST00000248139 MACROD2A1Z1Q3 448 aa28.54■■■□□ 2.16
RAB40C-201ENST00000248139 IDEP14735 1019 aa28.54■■■□□ 2.16
RAB40C-201ENST00000248139 AKR1B1P15121 316 aa28.54■■■□□ 2.16
RAB40C-201ENST00000248139 MSANTD4Q8NCY6 345 aa28.54■■■□□ 2.16
RAB40C-201ENST00000248139 SMCR8Q8TEV9 937 aaPredicted RBP28.54■■■□□ 2.16
RAB40C-201ENST00000248139 MMS19Q96T76 1030 aa28.54■■■□□ 2.16
RAB40C-201ENST00000248139 CALCRLQ16602 461 aa28.53■■■□□ 2.16
RAB40C-201ENST00000248139 KCNK18Q7Z418 384 aa28.53■■■□□ 2.16
RAB40C-201ENST00000248139 PNMA5Q96PV4 448 aa28.53■■■□□ 2.16
RAB40C-201ENST00000248139 ZNF185O15231 689 aa28.53■■■□□ 2.16
RAB40C-201ENST00000248139 SLC16A2P36021 539 aa28.53■■■□□ 2.16
RAB40C-201ENST00000248139 TTBK2Q6IQ55 1244 aa28.53■■■□□ 2.16
RAB40C-201ENST00000248139 CALML4Q96GE6 196 aa28.53■■■□□ 2.16
RAB40C-201ENST00000248139 FAM207AQ9NSI2 230 aaPredicted RBP28.53■■■□□ 2.16
RAB40C-201ENST00000248139 MYL1P05976 194 aa28.52■■■□□ 2.16
RAB40C-201ENST00000248139 WHAMMP3Q1A5X7 153 aa28.52■■■□□ 2.16
RAB40C-201ENST00000248139 DPP8Q6V1X1 898 aaPredicted RBP28.52■■■□□ 2.16
RAB40C-201ENST00000248139 JAKMIP2Q96AA8 810 aa28.52■■■□□ 2.16
RAB40C-201ENST00000248139 RAB21Q9UL25 225 aa28.52■■■□□ 2.16
RAB40C-201ENST00000248139 MAP2K7O14733 419 aa28.52■■■□□ 2.16
RAB40C-201ENST00000248139 ZMYND10O75800 440 aa28.52■■■□□ 2.16
RAB40C-201ENST00000248139 TNNI2P48788 182 aa28.52■■■□□ 2.16
RAB40C-201ENST00000248139 CDK5RAP2Q96SN8 1893 aa28.52■■■□□ 2.16
RAB40C-201ENST00000248139 TBC1D16Q8TBP0 767 aa28.51■■■□□ 2.15
RAB40C-201ENST00000248139 HAUS4Q9H6D7 363 aa28.51■■■□□ 2.15
RAB40C-201ENST00000248139 MYO1AQ9UBC5 1043 aa28.51■■■□□ 2.15
RAB40C-201ENST00000248139 CCDC155Q8N6L0 562 aa28.51■■■□□ 2.15
RAB40C-201ENST00000248139 CCDC47Q96A33 483 aaKnown RBP28.51■■■□□ 2.15
RAB40C-201ENST00000248139 USP21Q9UK80 565 aa28.51■■■□□ 2.15
RAB40C-201ENST00000248139 DAGLAQ9Y4D2 1042 aa28.51■■■□□ 2.15
RAB40C-201ENST00000248139 ZNF831Q5JPB2 1677 aa28.51■■■□□ 2.15
RAB40C-201ENST00000248139 ZNF263O14978 683 aa28.5■■■□□ 2.15
RAB40C-201ENST00000248139 SERPINB2P05120 415 aa28.5■■■□□ 2.15
RAB40C-201ENST00000248139 IL1R1P14778 569 aa28.5■■■□□ 2.15
RAB40C-201ENST00000248139 SV2BQ7L1I2 683 aa28.5■■■□□ 2.15
RAB40C-201ENST00000248139 TRAPPC11Q7Z392 1133 aa28.5■■■□□ 2.15
RAB40C-201ENST00000248139 GDAP1L1Q96MZ0 367 aa28.5■■■□□ 2.15
RAB40C-201ENST00000248139 CUEDC2Q9H467 287 aa28.5■■■□□ 2.15
RAB40C-201ENST00000248139 DDX4Q9NQI0 724 aaKnown RBP28.5■■■□□ 2.15
RAB40C-201ENST00000248139 L1RE1Q9UN81 338 aa28.5■■■□□ 2.15
RAB40C-201ENST00000248139 ECM1Q16610 540 aa28.5■■■□□ 2.15
RAB40C-201ENST00000248139 MTMR9Q96QG7 549 aa28.5■■■□□ 2.15
RAB40C-201ENST00000248139 BICDL2A1A5D9 508 aa28.49■■■□□ 2.15
RAB40C-201ENST00000248139 RAD21O60216 631 aa28.49■■■□□ 2.15
RAB40C-201ENST00000248139 MEA1Q16626 185 aa28.49■■■□□ 2.15
RAB40C-201ENST00000248139 MTMR4Q9NYA4 1195 aa28.49■■■□□ 2.15
RAB40C-201ENST00000248139 PHACTR2O75167 634 aa28.49■■■□□ 2.15
RAB40C-201ENST00000248139 CDK5RAP3Q96JB5 506 aa28.49■■■□□ 2.15
RAB40C-201ENST00000248139 DRC1Q96MC2 740 aa28.49■■■□□ 2.15
RAB40C-201ENST00000248139 RIOX1Q9H6W3 641 aa28.49■■■□□ 2.15
RAB40C-201ENST00000248139 ZNHIT6Q9NWK9 470 aaKnown RBP28.49■■■□□ 2.15
RAB40C-201ENST00000248139 ATP2B4P23634 1241 aa28.48■■■□□ 2.15
RAB40C-201ENST00000248139 PSMD14O00487 310 aa28.48■■■□□ 2.15
RAB40C-201ENST00000248139 PPP1R11O60927 126 aaPredicted RBP28.48■■■□□ 2.15
RAB40C-201ENST00000248139 SCNN1DP51172 638 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms