RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SERPINB13Q9UIV8 391 aa12.12□□□□□ -0.47
COPA-201ENST00000241704 FRMPD2Q68DX3 1309 aaPredicted RBP12.11□□□□□ -0.47
COPA-201ENST00000241704 SYNRGQ9UMZ2 1314 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 KIF23Q02241 960 aaPredicted RBP12.11□□□□□ -0.47
COPA-201ENST00000241704 INF2Q27J81 1249 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 PSTPIP2Q9H939 334 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 MAPK8IP1Q9UQF2 711 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 DNM2P50570 870 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 GPATCH4Q5T3I0 446 aaKnown RBP12.11□□□□□ -0.47
COPA-201ENST00000241704 NCAPH2Q6IBW4 605 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 PNMA2Q9UL42 364 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 CYP2D7A0A087X1C5 515 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 KRT86O43790 486 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 CAMTA2O94983 1202 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 NDUFA8P51970 172 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 TBC1D8BQ0IIM8 1120 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 PNOCQ13519 176 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 KCTD2Q14681 263 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 ALX1Q15699 326 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 TSGA10IPQ3SY00 556 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 NEK8Q86SG6 692 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 CSGALNACT2Q8N6G5 542 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 STAG1Q8WVM7 1258 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 WDR24Q96S15 920 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
COPA-201ENST00000241704 PPP6R2O75170 966 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 TRAPPC10P48553 1259 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 VAV2P52735 878 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 DPP9Q86TI2 863 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 TMTC1Q8IUR5 882 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 CCDC97Q96F63 343 aaPredicted RBP12.11□□□□□ -0.47
COPA-201ENST00000241704 MLXIPQ9HAP2 919 aa12.11□□□□□ -0.47
COPA-201ENST00000241704 TMEM232C9JQI7 657 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 IREB2P48200 963 aaKnown RBP12.1□□□□□ -0.47
COPA-201ENST00000241704 STAMQ92783 540 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.1□□□□□ -0.47
COPA-201ENST00000241704 MRPL11Q9Y3B7 192 aaKnown RBP12.1□□□□□ -0.47
COPA-201ENST00000241704 PRDX5P30044 214 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 SCARF1Q14162 830 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 ASPRV1Q53RT3 343 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 FNBP1Q96RU3 617 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 FERMT1Q9BQL6 677 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 NOC4LQ9BVI4 516 aaKnown RBP12.1□□□□□ -0.47
COPA-201ENST00000241704 VPS16Q9H269 839 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 FANCLQ9NW38 375 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 DNM3Q9UQ16 869 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 WDR19Q8NEZ3 1342 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 GSTTP1A0A1W2PQM5 241 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 RFX5P48382 616 aaPredicted RBP12.1□□□□□ -0.47
COPA-201ENST00000241704 PTGDRQ13258 359 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
COPA-201ENST00000241704 MICAL1Q8TDZ2 1067 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 CLIC6Q96NY7 704 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 NT5C3AQ9H0P0 336 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 DHX36Q9H2U1 1008 aaKnown RBP12.1□□□□□ -0.47
COPA-201ENST00000241704 RPS6KA5O75582 802 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 TTLL1O95922 423 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 KIF5AQ12840 1032 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 BIRC3Q13489 604 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 NFIXQ14938 502 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 SLC35F6Q8N357 371 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 SLC10A4Q96EP9 437 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 UIMC1Q96RL1 719 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 MTA3Q9BTC8 594 aa12.1□□□□□ -0.47
COPA-201ENST00000241704 PSEN1P49768 467 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 MAP2K1Q02750 393 aaPredicted RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 IFFO1Q0D2I5 559 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 TRIM14Q14142 442 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 ARHGEF16Q5VV41 709 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 DGKHQ86XP1 1220 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 SPICE1Q8N0Z3 855 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 LINC00301Q8NCQ3 95 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 ARMC2Q8NEN0 867 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 ALDH8A1Q9H2A2 487 aaPredicted RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 CD209Q9NNX6 404 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 MEGF6O75095 1541 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 PRPF3O43395 683 aaKnown RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 N4BP1O75113 896 aaKnown RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 MMP1P03956 469 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 GCFC2P16383 781 aaKnown RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 PRPF4BQ13523 1007 aaKnown RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 HERC4Q5GLZ8 1057 aaPredicted RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 CYP26C1Q6V0L0 522 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 ZNF354CQ86Y25 554 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 TBC1D10CQ8IV04 446 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 TRIML1Q8N9V2 468 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 GPR101Q96P66 508 aaPredicted RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 OR52Z1P0C646 297 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 ZRSR2Q15696 482 aaKnown RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 TTC19Q6DKK2 380 aaPredicted RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 FOXR1Q6PIV2 292 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 MAEAQ7L5Y9 396 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 FBXO11Q86XK2 927 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 REXO1L1PQ8IX06 675 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 ANKS4BQ8N8V4 417 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 FAM84BQ96KN1 310 aaPredicted RBP12.09□□□□□ -0.47
COPA-201ENST00000241704 TACC1O75410 805 aa12.09□□□□□ -0.47
COPA-201ENST00000241704 RPSAP08865 295 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms