RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 RGPD5Q99666 1765 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 TACC1O75410 805 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 ATP2C1P98194 919 aaPredicted RBP15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 HDLBPQ00341 1268 aaKnown RBP15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 SNX1Q13596 522 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 NAA35Q5VZE5 725 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 EHBP1Q8NDI1 1231 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 SPATA4Q8NEY3 305 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 NFU1Q9UMS0 254 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 C4AP0C0L4 1744 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 C4BP0C0L5 1744 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 ARFGEF2Q9Y6D5 1785 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 NUTM2BA6NNL0 878 aaPredicted RBP15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 NUTM2EB1AL46 878 aaPredicted RBP15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 CAND2O75155 1236 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 SMTNP53814 917 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 MYO1EQ12965 1108 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 ODF2Q5BJF6 829 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 PNMA8AQ86V59 439 aaPredicted RBP15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 SRBD1Q8N5C6 995 aaKnown RBP15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 PARD3BQ8TEW8 1205 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 CCDC43Q96MW1 224 aaKnown RBP15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 YIPF3Q9GZM5 350 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 CAPN11Q9UMQ6 739 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 RIC1Q4ADV7 1423 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 MYO5AQ9Y4I1 1855 aaKnown RBP15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 GRIN2DO15399 1336 aa15.68■□□□□ 0.1
PCDHB3-201ENST00000231130 USO1O60763 962 aaKnown RBP15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 FCER1AP12319 257 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 ASIC1P78348 528 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 PDE4DQ08499 809 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 GRIPAP1Q4V328 841 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 IQCEQ6IPM2 695 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 C8orf74Q6P047 294 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 MAATS1Q7Z4T9 603 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 CNOT6LQ96LI5 555 aaKnown RBP15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 MST1RQ04912 1400 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 ATF3P18847 181 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 PAFAH1B1P43034 410 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 ALX1Q15699 326 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 CYB5D1Q6P9G0 228 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 ZNF473Q8WTR7 871 aaKnown RBP15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 UIMC1Q96RL1 719 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 PACSIN2Q9UNF0 486 aaPredicted RBP15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 MAGEB6P1A0A0J9YX57 407 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 USP17L12C9JPN9 530 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 USP17L21D6R901 530 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 LSP1P33241 339 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 GYG1P46976 350 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 RASSF7Q02833 373 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 INF2Q27J81 1249 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 NLRC4Q9NPP4 1024 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 ABCC12Q96J65 1359 aa15.67■□□□□ 0.1
PCDHB3-201ENST00000231130 SPATA31A3Q5VYP0 1347 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 ZNF263O14978 683 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 DNM2P50570 870 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 GUCY2DQ02846 1103 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 PSMD2Q13200 908 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 TTMPQ5BVD1 217 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 DTHD1Q6ZMT9 781 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 RRAGAQ7L523 313 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 ADSSL1Q8N142 457 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 VGLL2Q8N8G2 317 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 RNPC3Q96LT9 517 aaKnown RBP15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 CCT8L2Q96SF2 557 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 DNAJC7Q99615 494 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 FBXO3Q9UK99 471 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 CCDC194A0A1B0GVG4 234 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 OPLAHO14841 1288 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 MYBL1P10243 752 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 EIF4A3P38919 411 aaKnown RBP15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 KCNB1Q14721 858 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 RBBP5Q15291 538 aaKnown RBP15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 CFAP58Q5T655 872 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 MSL1Q68DK7 614 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 GIGYF2Q6Y7W6 1299 aaKnown RBP15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 VCPKMTQ9H867 229 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 SLC39A2Q9NP94 309 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 TPX2Q9ULW0 747 aaKnown RBP15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 PRPF3O43395 683 aaKnown RBP15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 STARD3NLO95772 234 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 BMP15O95972 392 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 CARSP49589 748 aaKnown RBP15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 EVA1CP58658 441 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 CREG2Q8IUH2 290 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 SAAL1Q96ER3 474 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 ZIM3Q96PE6 472 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 SH3GL3Q99963 347 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 TMEM60Q9H2L4 133 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 CPVLQ9H3G5 476 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 EPB41L5Q9HCM4 733 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 RBM12Q9NTZ6 932 aaKnown RBP15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 SNX12Q9UMY4 172 aa15.66■□□□□ 0.1
PCDHB3-201ENST00000231130 FAM153BP0C7A2 387 aa15.65■□□□□ 0.1
PCDHB3-201ENST00000231130 ARID4AP29374 1257 aaPredicted RBP15.65■□□□□ 0.1
PCDHB3-201ENST00000231130 HLTFQ14527 1009 aaKnown RBP eCLIP15.65■□□□□ 0.1
PCDHB3-201ENST00000231130 PPP1R7Q15435 360 aa15.65■□□□□ 0.1
PCDHB3-201ENST00000231130 TRADDQ15628 312 aa15.65■□□□□ 0.1
PCDHB3-201ENST00000231130 FAM153CQ494X1 144 aa15.65■□□□□ 0.1
PCDHB3-201ENST00000231130 ANKRD40Q6AI12 368 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms