RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CCDC87Q9NVE4 849 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 USTQ9Y2C2 406 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 PPFIA2O75334 1257 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 DDIT3P35638 169 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 TOB2Q14106 344 aaPredicted RBP15.1■□□□□ 0.01
HCFC2-201ENST00000229330 DENND2AQ9ULE3 1009 aa15.1■□□□□ 0.01
HCFC2-201ENST00000229330 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.1■□□□□ 0.01
HCFC2-201ENST00000229330 BZW2Q9Y6E2 419 aaKnown RBP15.1■□□□□ 0.01
HCFC2-201ENST00000229330 ANO9A1A5B4 782 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 EIF4A3P38919 411 aaKnown RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 MIER3Q7Z3K6 550 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 SPZ1Q9BXG8 430 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 DNM3Q9UQ16 869 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 TMEM94Q12767 1356 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 FMNL1O95466 1100 aaPredicted RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 PHBP35232 272 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 FAM98CQ17RN3 349 aaKnown RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 APOA5Q6Q788 366 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 P2RX5Q93086 422 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 ELAC2Q9BQ52 826 aaKnown RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 ARMCX3Q9UH62 379 aaPredicted RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 PRR36Q9H6K5 1346 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 VPS41P49754 854 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 IRX1P78414 480 aaPredicted RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 MRPS25P82663 173 aaKnown RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 CAPRIN2Q6IMN6 1127 aaKnown RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 NEK9Q8TD19 979 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 LZTS2Q9BRK4 669 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 MAGEF1Q9HAY2 307 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 USP6P35125 1406 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 MEFVO15553 781 aaPredicted RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 MAP3K7O43318 606 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 GCNT3O95395 438 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 LDHBP07195 334 aaKnown RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 ADCY7P51828 1080 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 PPARAQ07869 468 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 BIRC3Q13489 604 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 NBPF10Q6P3W6 841 aaKnown RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 SPATA5Q8NB90 893 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 VIPAS39Q9H9C1 493 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 ABHD10Q9NUJ1 306 aa15.09■□□□□ 0.01
HCFC2-201ENST00000229330 DBNLQ9UJU6 430 aaKnown RBP15.09■□□□□ 0.01
HCFC2-201ENST00000229330 ATF2P15336 505 aa15.08■□□□□ 0.01
HCFC2-201ENST00000229330 PLCG2P16885 1265 aa15.08■□□□□ 0.01
HCFC2-201ENST00000229330 ELF1P32519 619 aa15.08■□□□□ 0.01
HCFC2-201ENST00000229330 MYO1EQ12965 1108 aa15.08■□□□□ 0.01
HCFC2-201ENST00000229330 TCP11X2Q5H9J9 407 aa15.08■□□□□ 0.01
HCFC2-201ENST00000229330 WDR78Q5VTH9 848 aa15.08■□□□□ 0.01
HCFC2-201ENST00000229330 RESP18Q5W5W9 173 aa15.08■□□□□ 0.01
HCFC2-201ENST00000229330 IFNL3Q8IZI9 196 aa15.08■□□□□ 0.01
HCFC2-201ENST00000229330 MAGOHBQ96A72 148 aaKnown RBP15.08■□□□□ 0.01
HCFC2-201ENST00000229330 NT5C3AQ9H0P0 336 aa15.08■□□□□ 0.01
HCFC2-201ENST00000229330 ADCY10Q96PN6 1610 aa15.08■□□□□ 0.01
HCFC2-201ENST00000229330 EXOC3O60645 756 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 TRIM37O94972 964 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 BBOF1Q8ND07 529 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 THAP9Q9H5L6 903 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 MRPL44Q9H9J2 332 aaKnown RBP15.08■□□□□ 0
HCFC2-201ENST00000229330 STK24Q9Y6E0 443 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 CLASP1Q7Z460 1538 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 CORO7P57737 925 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 IQCB1Q15051 598 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 PDCD7Q8N8D1 485 aaKnown RBP15.08■□□□□ 0
HCFC2-201ENST00000229330 ABTB1Q969K4 478 aaPredicted RBP15.08■□□□□ 0
HCFC2-201ENST00000229330 SRPRBQ9Y5M8 271 aaKnown RBP15.08■□□□□ 0
HCFC2-201ENST00000229330 PARP3Q9Y6F1 533 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 BCORL1Q5H9F3 1711 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 RPAP1Q9BWH6 1393 aaPredicted RBP15.08■□□□□ 0
HCFC2-201ENST00000229330 CREB3O43889 395 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 ANKRD35Q8N283 1001 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 MB21D1Q8N884 522 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 CNBD1Q8NA66 436 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 LPIN2Q92539 896 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 RIC8AQ9NPQ8 531 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 PCDHB13Q9Y5F0 798 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 IQGAP3Q86VI3 1631 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 KIF11P52732 1056 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 PALM2Q8IXS6 379 aa15.08■□□□□ 0
HCFC2-201ENST00000229330 GEMIN8Q9NWZ8 242 aaKnown RBP15.08■□□□□ 0
HCFC2-201ENST00000229330 YY1AP1Q9H869 796 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 NPHP4O75161 1426 aaPredicted RBP15.07■□□□□ 0
HCFC2-201ENST00000229330 NCOA3Q9Y6Q9 1424 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 TARSL2A2RTX5 802 aaKnown RBP15.07■□□□□ 0
HCFC2-201ENST00000229330 GMNNO75496 209 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 TECP42680 631 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 DRP2Q13474 957 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 TTLL12Q14166 644 aaPredicted RBP15.07■□□□□ 0
HCFC2-201ENST00000229330 MAN2A1Q16706 1144 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 NYAP1Q6ZVC0 841 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 PAGE5Q96GU1 130 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 COPRSQ9NQ92 184 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 ZBTB12Q9Y330 459 aaPredicted RBP15.07■□□□□ 0
HCFC2-201ENST00000229330 IGSF1Q8N6C5 1336 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 FAM170AA1A519 330 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 RIMBP2O15034 1052 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 OR52Z1P0C646 297 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 SERPINB6P35237 376 aa15.07■□□□□ 0
HCFC2-201ENST00000229330 ARL1P40616 181 aaPredicted RBP15.07■□□□□ 0
HCFC2-201ENST00000229330 KSR1Q8IVT5 923 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms