RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 H7C1D1 291 aa21.52■■□□□ 1.04
YBX3-201ENST00000228251 CCP110O43303 1012 aa21.52■■□□□ 1.04
YBX3-201ENST00000228251 TNNI2P48788 182 aa21.52■■□□□ 1.04
YBX3-201ENST00000228251 ADKP55263 362 aaKnown RBP21.52■■□□□ 1.04
YBX3-201ENST00000228251 RBM10P98175 930 aaKnown RBP21.52■■□□□ 1.04
YBX3-201ENST00000228251 ABCB5Q2M3G0 1257 aa21.52■■□□□ 1.04
YBX3-201ENST00000228251 TTI2Q6NXR4 508 aa21.52■■□□□ 1.04
YBX3-201ENST00000228251 ZSCAN29Q8IWY8 852 aaPredicted RBP21.52■■□□□ 1.04
YBX3-201ENST00000228251 HAS1Q92839 578 aa21.52■■□□□ 1.04
YBX3-201ENST00000228251 PSTPIP2Q9H939 334 aa21.52■■□□□ 1.04
YBX3-201ENST00000228251 STK17AQ9UEE5 414 aa21.52■■□□□ 1.04
YBX3-201ENST00000228251 GCFC2P16383 781 aaKnown RBP21.51■■□□□ 1.03
YBX3-201ENST00000228251 KCNA3P22001 575 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 SLC1A4P43007 532 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 COPB1P53618 953 aaKnown RBP21.51■■□□□ 1.03
YBX3-201ENST00000228251 SYCP1Q15431 976 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 TMEM119Q4V9L6 283 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 CNNM4Q6P4Q7 775 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 TRIM65Q6PJ69 517 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 CRYGNQ8WXF5 182 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 MBOAT7Q96N66 472 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 GLT8D2Q9H1C3 349 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 LRWD1Q9UFC0 647 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 SYNPO2Q9UMS6 1093 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 TRIM49BA6NDI0 452 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 F5H6K3 240 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 KLRC3Q07444 240 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 CDC37Q16543 378 aaPredicted RBP21.51■■□□□ 1.03
YBX3-201ENST00000228251 FILIP1LQ4L180 1135 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 RSBN1LQ6PCB5 846 aaPredicted RBP21.51■■□□□ 1.03
YBX3-201ENST00000228251 DHTKD1Q96HY7 919 aaPredicted RBP21.51■■□□□ 1.03
YBX3-201ENST00000228251 MAPK8IP1Q9UQF2 711 aa21.51■■□□□ 1.03
YBX3-201ENST00000228251 SPDYE2BA6NHP3 402 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 KCNJ18B7U540 433 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 AKR1B15C9JRZ8 316 aaPredicted RBP21.5■■□□□ 1.03
YBX3-201ENST00000228251 GDF11O95390 407 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 NDUFB10O96000 172 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 VIL1P09327 827 aaKnown RBP21.5■■□□□ 1.03
YBX3-201ENST00000228251 SPDYE6P0CI01 402 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 KCNJ12Q14500 433 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 CCDC93Q567U6 631 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 BTNL9Q6UXG8 535 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 KIF18AQ8NI77 898 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 ANKRD7Q92527 254 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 CALML4Q96GE6 196 aa21.5■■□□□ 1.03
YBX3-201ENST00000228251 GTPBP4Q9BZE4 634 aaKnown RBP21.5■■□□□ 1.03
YBX3-201ENST00000228251 CYP3A7-CYP3A51PA0A087WV96 503 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 GYPCP04921 128 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 CYP3A7P24462 503 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 MMP14P50281 582 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 RBL2Q08999 1139 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 TMEM266Q2M3C6 531 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 TTLL6Q8N841 843 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 DUSP9Q99956 384 aaKnown RBP21.49■■□□□ 1.03
YBX3-201ENST00000228251 NUDT12Q9BQG2 462 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 THAP9Q9H5L6 903 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 L2HGDHQ9H9P8 463 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 PPP2R2CQ9Y2T4 447 aa21.49■■□□□ 1.03
YBX3-201ENST00000228251 POTEMA6NI47 508 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 MEIS2O14770 477 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 MFAP3LO75121 409 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 ETF1P62495 437 aaKnown RBP21.48■■□□□ 1.03
YBX3-201ENST00000228251 RTKN2Q8IZC4 609 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 ZNF592Q92610 1267 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 P2RX7Q99572 595 aaKnown RBP21.48■■□□□ 1.03
YBX3-201ENST00000228251 TRIM34Q9BYJ4 488 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 DDX25Q9UHL0 483 aaKnown RBP21.48■■□□□ 1.03
YBX3-201ENST00000228251 HERC5Q9UII4 1024 aaKnown RBP21.48■■□□□ 1.03
YBX3-201ENST00000228251 PCDHA1Q9Y5I3 950 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 CNTNAP1P78357 1384 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 SMCHD1A6NHR9 2005 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 PSMA7O14818 248 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 GH2P01242 217 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 CCT6AP40227 531 aaKnown RBP21.48■■□□□ 1.03
YBX3-201ENST00000228251 AMPD3Q01432 767 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 STK4Q13043 487 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 HYIQ5T013 277 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 NAP1L4Q99733 375 aaKnown RBP21.48■■□□□ 1.03
YBX3-201ENST00000228251 RAB34Q9BZG1 259 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 TAB2Q9NYJ8 693 aa21.48■■□□□ 1.03
YBX3-201ENST00000228251 A0A1W2PRG0 241 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 MYMKA6NI61 221 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP17L15C9J2P7 530 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP17L13C9JLJ4 530 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP17L11C9JVI0 530 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP17L18D6R9N7 530 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP17L22D6RA61 530 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP17L17D6RBQ6 530 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP17L19D6RCP7 530 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP17L20D6RJB6 530 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 N4BP3O15049 544 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 FANCGO15287 622 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 EEF1GP26641 437 aaKnown RBP21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP11P51784 963 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 ASIC1P78348 528 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 EHHADHQ08426 723 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 PDE4DQ08499 809 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP17L24Q0WX57 530 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 STIM1Q13586 685 aa21.47■■□□□ 1.03
YBX3-201ENST00000228251 USP17L6PQ6QN14 398 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms