RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 TTC26A0AVF1 554 aa24.6■■□□□ 1.53
SMARCD2-201ENST00000225742 CALCRLQ16602 461 aa24.6■■□□□ 1.53
SMARCD2-201ENST00000225742 WHAMMP3Q1A5X7 153 aa24.6■■□□□ 1.53
SMARCD2-201ENST00000225742 KIF4BQ2VIQ3 1234 aa24.6■■□□□ 1.53
SMARCD2-201ENST00000225742 SV2BQ7L1I2 683 aa24.6■■□□□ 1.53
SMARCD2-201ENST00000225742 TUBGCP2Q9BSJ2 902 aa24.6■■□□□ 1.53
SMARCD2-201ENST00000225742 POLRMTO00411 1230 aaKnown RBP24.59■■□□□ 1.53
SMARCD2-201ENST00000225742 PPEF1O14829 653 aaPredicted RBP24.59■■□□□ 1.53
SMARCD2-201ENST00000225742 KIF20AO95235 890 aa24.59■■□□□ 1.53
SMARCD2-201ENST00000225742 NDUFA10O95299 355 aa24.59■■□□□ 1.53
SMARCD2-201ENST00000225742 CHMP4BP1P59074 171 aa24.59■■□□□ 1.53
SMARCD2-201ENST00000225742 GTF2IP78347 998 aa24.59■■□□□ 1.53
SMARCD2-201ENST00000225742 BRD3Q15059 726 aa24.59■■□□□ 1.53
SMARCD2-201ENST00000225742 SLC35F6Q8N357 371 aa24.59■■□□□ 1.53
SMARCD2-201ENST00000225742 UBA5Q9GZZ9 404 aa24.59■■□□□ 1.53
SMARCD2-201ENST00000225742 TTLL1O95922 423 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 DDR1Q08345 913 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 FIGNQ5HY92 759 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 SEPT12Q8IYM1 358 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 HAUS4Q9H6D7 363 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 ATP6V0A2Q9Y487 856 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 PNMA6FA0A0J9YX94 578 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 MEA1Q16626 185 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 CC2D1AQ6P1N0 951 aaPredicted RBP24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 POTEDQ86YR6 584 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 RIC8AQ9NPQ8 531 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 LRWD1Q9UFC0 647 aa24.58■■□□□ 1.53
SMARCD2-201ENST00000225742 FGFR1OPO95684 399 aaKnown RBP24.57■■□□□ 1.52
SMARCD2-201ENST00000225742 KRT83P78385 493 aa24.57■■□□□ 1.52
SMARCD2-201ENST00000225742 ANKRD40Q6AI12 368 aa24.57■■□□□ 1.52
SMARCD2-201ENST00000225742 FOXR2Q6PJQ5 311 aa24.57■■□□□ 1.52
SMARCD2-201ENST00000225742 UNC13DQ70J99 1090 aa24.57■■□□□ 1.52
SMARCD2-201ENST00000225742 ZSCAN29Q8IWY8 852 aaPredicted RBP24.57■■□□□ 1.52
SMARCD2-201ENST00000225742 NAP1L4Q99733 375 aaKnown RBP24.57■■□□□ 1.52
SMARCD2-201ENST00000225742 SLF1Q9BQI6 1058 aa24.57■■□□□ 1.52
SMARCD2-201ENST00000225742 PARD6BQ9BYG5 372 aa24.57■■□□□ 1.52
SMARCD2-201ENST00000225742 ZNHIT6Q9NWK9 470 aaKnown RBP24.57■■□□□ 1.52
SMARCD2-201ENST00000225742 ABCB11O95342 1321 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 A0A1W2PQJ5 194 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 AKR1B1P15121 316 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 ZNF543Q08ER8 600 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 STK4Q13043 487 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 GRB10Q13322 594 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 TERF2Q15554 542 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 PPP4R3AQ6IN85 833 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 CNOT6LQ96LI5 555 aaKnown RBP24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 TTYH3Q9C0H2 523 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 ARFGAP3Q9NP61 516 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 TMEM260Q9NX78 707 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 FRMPD2Q68DX3 1309 aaPredicted RBP24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 A0A0U1RQJ8 604 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 CCDC151A5D8V7 595 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 TUBBP07437 444 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 TXKP42681 527 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 ZBED6P86452 979 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 CDK17Q00537 523 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 GPATCH4Q5T3I0 446 aaKnown RBP24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 MEX3CQ5U5Q3 659 aaKnown RBP24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 CENPPQ6IPU0 288 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 DPP8Q6V1X1 898 aaPredicted RBP24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 ATRIPQ8WXE1 791 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 CDK5RAP3Q96JB5 506 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 ERGIC2Q96RQ1 377 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 CHP1Q99653 195 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 SERPINB13Q9UIV8 391 aa24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 TRPC5Q9UL62 973 aaPredicted RBP24.56■■□□□ 1.52
SMARCD2-201ENST00000225742 B4DLN1 442 aa24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 PES1O00541 588 aaKnown RBP24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 SLC26A4O43511 780 aa24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 CYLC1P35663 651 aaPredicted RBP24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 MTIF2P46199 727 aaKnown RBP24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 TBC1D8BQ0IIM8 1120 aa24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 PSMD2Q13200 908 aa24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 CCDC170Q8IYT3 715 aa24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 EHBP1Q8NDI1 1231 aa24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 GLT8D2Q9H1C3 349 aa24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 BLOC1S4Q9NUP1 217 aa24.55■■□□□ 1.52
SMARCD2-201ENST00000225742 GREB1LQ9C091 1923 aaPredicted RBP24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 PLA2G4AP47712 749 aa24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 PICALMQ13492 652 aa24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 FKBP15Q5T1M5 1219 aa24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 HHIPL2Q6UWX4 724 aa24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 MSANTD4Q8NCY6 345 aa24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 HNRNPLLQ8WVV9 542 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 PNMA5Q96PV4 448 aa24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 GCFC2P16383 781 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 MRPL12P52815 198 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 SEPT2Q15019 361 aa24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 WDR59Q6PJI9 974 aa24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 LARP4BQ92615 738 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 COA7Q96BR5 231 aa24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 ZC3H12CQ9C0D7 883 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 JMJD4Q9H9V9 463 aa24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 REXO2Q9Y3B8 237 aaKnown RBP24.54■■□□□ 1.52
SMARCD2-201ENST00000225742 PSMD14O00487 310 aa24.53■■□□□ 1.52
SMARCD2-201ENST00000225742 HLA-DOAP06340 250 aa24.53■■□□□ 1.52
SMARCD2-201ENST00000225742 KRT79Q5XKE5 535 aa24.53■■□□□ 1.52
SMARCD2-201ENST00000225742 LRRC47Q8N1G4 583 aaKnown RBP24.53■■□□□ 1.52
SMARCD2-201ENST00000225742 GUF1Q8N442 669 aaKnown RBP24.53■■□□□ 1.52
SMARCD2-201ENST00000225742 RAD54LQ92698 747 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms