RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 AKAP17AQ02040 695 aaKnown RBP18.96■□□□□ 0.63
LIM2-201ENST00000221973 QRICH1Q2TAL8 776 aa18.96■□□□□ 0.63
LIM2-201ENST00000221973 WDR78Q5VTH9 848 aa18.96■□□□□ 0.63
LIM2-201ENST00000221973 TRPV1Q8NER1 839 aa18.96■□□□□ 0.63
LIM2-201ENST00000221973 MTMR8Q96EF0 704 aa18.96■□□□□ 0.63
LIM2-201ENST00000221973 DDX11Q96FC9 970 aa18.96■□□□□ 0.63
LIM2-201ENST00000221973 RAVER2Q9HCJ3 691 aaKnown RBP18.96■□□□□ 0.63
LIM2-201ENST00000221973 ZNF236Q9UL36 1845 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 PTPDC1A2A3K4 754 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 FDX1P10109 184 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 BMP8BP34820 402 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 SLC4A3P48751 1232 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 CUL4AQ13619 759 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 BECN1Q14457 450 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 PLS1Q14651 629 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 TMEM132BQ14DG7 1078 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 TRIM22Q8IYM9 498 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 MB21D1Q8N884 522 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 REPS2Q8NFH8 660 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 LLPHQ9BRT6 129 aaKnown RBP18.95■□□□□ 0.62
LIM2-201ENST00000221973 RNF26Q9BY78 433 aaPredicted RBP18.95■□□□□ 0.62
LIM2-201ENST00000221973 SPATC1LQ9H0A9 340 aa18.95■□□□□ 0.62
LIM2-201ENST00000221973 SEC63Q9UGP8 760 aaKnown RBP18.95■□□□□ 0.62
LIM2-201ENST00000221973 PNMA6FA0A0J9YX94 578 aa18.94■□□□□ 0.62
LIM2-201ENST00000221973 ZBTB5O15062 677 aa18.94■□□□□ 0.62
LIM2-201ENST00000221973 PRPF3O43395 683 aaKnown RBP18.94■□□□□ 0.62
LIM2-201ENST00000221973 TAL1P17542 331 aaPredicted RBP18.94■□□□□ 0.62
LIM2-201ENST00000221973 SYN1P17600 705 aa18.94■□□□□ 0.62
LIM2-201ENST00000221973 CYP2C19P33261 490 aa18.94■□□□□ 0.62
LIM2-201ENST00000221973 LRRC26Q2I0M4 334 aa18.94■□□□□ 0.62
LIM2-201ENST00000221973 CWC22Q9HCG8 908 aaKnown RBP18.94■□□□□ 0.62
LIM2-201ENST00000221973 FOXD4L1Q9NU39 408 aa18.94■□□□□ 0.62
LIM2-201ENST00000221973 ORC3Q9UBD5 711 aaPredicted RBP18.94■□□□□ 0.62
LIM2-201ENST00000221973 PPP1R11O60927 126 aaPredicted RBP18.93■□□□□ 0.62
LIM2-201ENST00000221973 COBLO75128 1261 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 ERCC3P19447 782 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 USH1GQ495M9 461 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 MFSD14CQ5VZR4 134 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 FBXO11Q86XK2 927 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 SHCBP1Q8NEM2 672 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 LRCH3Q96II8 777 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 AGBL1Q96MI9 1066 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 ZNF214Q9UL59 606 aaPredicted RBP18.93■□□□□ 0.62
LIM2-201ENST00000221973 CCPG1Q9ULG6 757 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.93■□□□□ 0.62
LIM2-201ENST00000221973 IVNS1ABPQ9Y6Y0 642 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 ZNF536O15090 1300 aa18.93■□□□□ 0.62
LIM2-201ENST00000221973 STRNO43815 780 aa18.92■□□□□ 0.62
LIM2-201ENST00000221973 ICAM1P05362 532 aa18.92■□□□□ 0.62
LIM2-201ENST00000221973 HSP90AA1P07900 732 aaKnown RBP18.92■□□□□ 0.62
LIM2-201ENST00000221973 ADORA2AP29274 412 aa18.92■□□□□ 0.62
LIM2-201ENST00000221973 MAGEA10P43363 369 aaPredicted RBP18.92■□□□□ 0.62
LIM2-201ENST00000221973 HEATR3Q7Z4Q2 680 aa18.92■□□□□ 0.62
LIM2-201ENST00000221973 SMARCC2Q8TAQ2 1214 aa18.92■□□□□ 0.62
LIM2-201ENST00000221973 AMNQ9BXJ7 453 aa18.92■□□□□ 0.62
LIM2-201ENST00000221973 DDX20Q9UHI6 824 aaKnown RBP18.92■□□□□ 0.62
LIM2-201ENST00000221973 DEXIO95424 95 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 CYBAP13498 195 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 FDPSP14324 419 aaKnown RBP18.91■□□□□ 0.62
LIM2-201ENST00000221973 STAT3P40763 770 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 OAZ1P54368 228 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 PKN1Q16512 942 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 PFKFB3Q16875 520 aaPredicted RBP18.91■□□□□ 0.62
LIM2-201ENST00000221973 OLFML2BQ68BL8 750 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 SNRNP48Q6IEG0 339 aaKnown RBP18.91■□□□□ 0.62
LIM2-201ENST00000221973 SPRYD3Q8NCJ5 442 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 GPKOWQ92917 476 aaPredicted RBP eCLIP18.91■□□□□ 0.62
LIM2-201ENST00000221973 AIFM3Q96NN9 605 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 TEX13BQ9BXU2 312 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 SMC3Q9UQE7 1217 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 STK36Q9NRP7 1315 aa18.91■□□□□ 0.62
LIM2-201ENST00000221973 ATP2A1O14983 1001 aa18.9■□□□□ 0.62
LIM2-201ENST00000221973 ALAS1P13196 640 aa18.9■□□□□ 0.62
LIM2-201ENST00000221973 SCG2P13521 617 aa18.9■□□□□ 0.62
LIM2-201ENST00000221973 HMGN5P82970 282 aaKnown RBP18.9■□□□□ 0.62
LIM2-201ENST00000221973 WWC2Q6AWC2 1192 aa18.9■□□□□ 0.62
LIM2-201ENST00000221973 FAM184AQ8NB25 1140 aa18.9■□□□□ 0.62
LIM2-201ENST00000221973 HOMER2Q9NSB8 354 aa18.9■□□□□ 0.62
LIM2-201ENST00000221973 RIPK3Q9Y572 518 aa18.9■□□□□ 0.62
LIM2-201ENST00000221973 PCDHA1Q9Y5I3 950 aa18.9■□□□□ 0.62
LIM2-201ENST00000221973 COL11A1P12107 1806 aaPredicted RBP18.9■□□□□ 0.62
LIM2-201ENST00000221973 A0A0C4DFX4 3053 aa18.89■□□□□ 0.61
LIM2-201ENST00000221973 FOSBP53539 338 aa18.89■□□□□ 0.61
LIM2-201ENST00000221973 DPP9Q86TI2 863 aa18.89■□□□□ 0.61
LIM2-201ENST00000221973 RIOX2Q8IUF8 465 aa18.89■□□□□ 0.61
LIM2-201ENST00000221973 INTS4Q96HW7 963 aaKnown RBP18.89■□□□□ 0.61
LIM2-201ENST00000221973 ALG1Q9BT22 464 aa18.89■□□□□ 0.61
LIM2-201ENST00000221973 GJB2P29033 226 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 CNGA1P29973 690 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 TRAF1Q13077 416 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 NCAPG2Q86XI2 1143 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 ABRAQ8N0Z2 381 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 WASF1Q92558 559 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 TRERF1Q96PN7 1200 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 MROH8Q9H579 483 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 RNF146Q9NTX7 359 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 BARHL2Q9NY43 387 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 VPS54Q9P1Q0 977 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 PNMA2Q9UL42 364 aa18.88■□□□□ 0.61
LIM2-201ENST00000221973 ZNFX1Q9P2E3 1918 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms