RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 RPN1P04843 607 aaKnown RBP17.78■□□□□ 0.44
SF3A2-201ENST00000221494 HERVK_113P62684 666 aa17.78■□□□□ 0.44
SF3A2-201ENST00000221494 FIGNQ5HY92 759 aa17.78■□□□□ 0.44
SF3A2-201ENST00000221494 CCDC122Q5T0U0 273 aa17.78■□□□□ 0.44
SF3A2-201ENST00000221494 C7orf43Q8WVR3 580 aa17.78■□□□□ 0.44
SF3A2-201ENST00000221494 SLC4A4Q9Y6R1 1079 aa17.78■□□□□ 0.44
SF3A2-201ENST00000221494 C10orf71Q711Q0 1435 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 TTC26A0AVF1 554 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 PARP1P09874 1014 aaKnown RBP17.77■□□□□ 0.44
SF3A2-201ENST00000221494 ATP2B1P20020 1258 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 GUCY2CP25092 1073 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 GTF2A1P52655 376 aaPredicted RBP17.77■□□□□ 0.44
SF3A2-201ENST00000221494 PPARAQ07869 468 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 GRIK5Q16478 980 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 CATIPQ7Z7H3 387 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 SMYD4Q8IYR2 804 aaPredicted RBP17.77■□□□□ 0.44
SF3A2-201ENST00000221494 ADSSL1Q8N142 457 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 NUP133Q8WUM0 1156 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 JAKMIP2Q96AA8 810 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 MMS19Q96T76 1030 aa17.77■□□□□ 0.44
SF3A2-201ENST00000221494 TMX4Q9H1E5 349 aaPredicted RBP17.77■□□□□ 0.44
SF3A2-201ENST00000221494 TNKSO95271 1327 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 A0A1W2PQJ5 194 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 RNF225M0QZC1 329 aaPredicted RBP17.77■□□□□ 0.43
SF3A2-201ENST00000221494 RIMBP2O15034 1052 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 OPA1O60313 960 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 ABL1P00519 1130 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 EPB41P11171 864 aaKnown RBP17.77■□□□□ 0.43
SF3A2-201ENST00000221494 PTGDRQ13258 359 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 FOXR1Q6PIV2 292 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 KIAA1328Q86T90 577 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 PACS2Q86VP3 889 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 SPATS2Q86XZ4 545 aaKnown RBP17.77■□□□□ 0.43
SF3A2-201ENST00000221494 AENQ8WTP8 325 aaKnown RBP17.77■□□□□ 0.43
SF3A2-201ENST00000221494 CHP1Q99653 195 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 SELENOOQ9BVL4 669 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 ZC3H12CQ9C0D7 883 aaKnown RBP17.77■□□□□ 0.43
SF3A2-201ENST00000221494 INCENPQ9NQS7 918 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 CACNA1SQ13698 1873 aa17.77■□□□□ 0.43
SF3A2-201ENST00000221494 ATP1A1P05023 1023 aaKnown RBP17.76■□□□□ 0.43
SF3A2-201ENST00000221494 LDHBP07195 334 aaKnown RBP17.76■□□□□ 0.43
SF3A2-201ENST00000221494 TNFRSF8P28908 595 aa17.76■□□□□ 0.43
SF3A2-201ENST00000221494 NT5C2P49902 561 aa17.76■□□□□ 0.43
SF3A2-201ENST00000221494 DYNLL1P63167 89 aaKnown RBP17.76■□□□□ 0.43
SF3A2-201ENST00000221494 RRP12Q5JTH9 1297 aaKnown RBP17.76■□□□□ 0.43
SF3A2-201ENST00000221494 SWT1Q5T5J6 900 aaKnown RBP17.76■□□□□ 0.43
SF3A2-201ENST00000221494 COA1Q9GZY4 146 aa17.76■□□□□ 0.43
SF3A2-201ENST00000221494 MAGEF1Q9HAY2 307 aa17.76■□□□□ 0.43
SF3A2-201ENST00000221494 GEMIN8Q9NWZ8 242 aaKnown RBP17.76■□□□□ 0.43
SF3A2-201ENST00000221494 VPS54Q9P1Q0 977 aa17.76■□□□□ 0.43
SF3A2-201ENST00000221494 PHACTR2O75167 634 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 ZBED6P86452 979 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 MMS22LQ6ZRQ5 1243 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 POTEDQ86YR6 584 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 FAM114A1Q8IWE2 563 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 SHISA4Q96DD7 197 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 SH3GL2Q99962 352 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 TOMM22Q9NS69 142 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 MAGEC2Q9UBF1 373 aaPredicted RBP17.75■□□□□ 0.43
SF3A2-201ENST00000221494 GOLGA6CA6NDK9 693 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 GOLGA6BA6NDN3 693 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 FGRP09769 529 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 GOLGA6DP0CG33 693 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 NNTQ13423 1086 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 NPY5RQ15761 445 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 ALS2CLQ60I27 953 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 WDR59Q6PJI9 974 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 IRF2BP1Q8IU81 584 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 CCDC155Q8N6L0 562 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 ZSCAN10Q96SZ4 725 aaPredicted RBP17.75■□□□□ 0.43
SF3A2-201ENST00000221494 TTYH3Q9C0H2 523 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 DEF6Q9H4E7 631 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 GOLGA6AQ9NYA3 693 aa17.75■□□□□ 0.43
SF3A2-201ENST00000221494 FAM205AQ6ZU69 1335 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 EBAG9O00559 213 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 PSMA7O14818 248 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 ZBTB7AO95365 584 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 CDC25AP30304 524 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 HOXA7P31268 230 aaPredicted RBP17.74■□□□□ 0.43
SF3A2-201ENST00000221494 USP8P40818 1118 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 APBA1Q02410 837 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 TMTC3Q6ZXV5 915 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 DZIP1Q86YF9 867 aaKnown RBP17.74■□□□□ 0.43
SF3A2-201ENST00000221494 TRIM58Q8NG06 486 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 SDR42E1Q8WUS8 393 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 DHTKD1Q96HY7 919 aaPredicted RBP17.74■□□□□ 0.43
SF3A2-201ENST00000221494 CEP89Q96ST8 783 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 CUEDC2Q9H467 287 aa17.74■□□□□ 0.43
SF3A2-201ENST00000221494 FAM205CA6NFA0 338 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 TFRCP02786 760 aaKnown RBP17.73■□□□□ 0.43
SF3A2-201ENST00000221494 CALML3P27482 149 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 CASP1P29466 404 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 GGCXP38435 758 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 PRCPP42785 496 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 SKOR1P84550 965 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 ZNF174Q15697 407 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 EARS2Q5JPH6 523 aaKnown RBP17.73■□□□□ 0.43
SF3A2-201ENST00000221494 EMBQ6PCB8 327 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 CAGE1Q8TC20 777 aa17.73■□□□□ 0.43
SF3A2-201ENST00000221494 ZKSCAN3Q9BRR0 538 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms