RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 MARCH6O60337 910 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 PLEKP08567 350 aaPredicted RBP16.35■□□□□ 0.21
CNOT3-201ENST00000221232 PDHBP11177 359 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 HERVK_113P62684 666 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 KRT26Q7Z3Y9 468 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 CCDC47Q96A33 483 aaKnown RBP16.35■□□□□ 0.21
CNOT3-201ENST00000221232 LACRTQ9GZZ8 138 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 THAP9Q9H5L6 903 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 FAM207AQ9NSI2 230 aaPredicted RBP16.35■□□□□ 0.21
CNOT3-201ENST00000221232 TBC1D7Q9P0N9 293 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 MYO6Q9UM54 1294 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 CTAGE15A4D2H0 777 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 FAM196BA6NMK8 535 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 CTAGE8P0CG41 777 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 EEF1GP26641 437 aaKnown RBP16.35■□□□□ 0.21
CNOT3-201ENST00000221232 RAD51AP2Q09MP3 1159 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 KCTD1Q719H9 257 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 CTAGE6Q86UF2 777 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 CTAGE4Q8IX94 777 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 PLCD3Q8N3E9 789 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 KIAA0895Q8NCT3 520 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 DRC1Q96MC2 740 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 LZTS2Q9BRK4 669 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 SEMA6BQ9H3T3 888 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 ABCB6Q9NP58 842 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 DAGLAQ9Y4D2 1042 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 MYH8P13535 1937 aa16.35■□□□□ 0.21
CNOT3-201ENST00000221232 MYMKA6NI61 221 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 ZMYND10O75800 440 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 ATP1A1P05023 1023 aaKnown RBP16.34■□□□□ 0.21
CNOT3-201ENST00000221232 ATP2B4P23634 1241 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 CCNE1P24864 410 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 TRIM14Q14142 442 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 DDX4Q9NQI0 724 aaKnown RBP16.34■□□□□ 0.21
CNOT3-201ENST00000221232 CAPN11Q9UMQ6 739 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 GYS1P13807 737 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 DNM2P50570 870 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 GRB10Q13322 594 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 SV2BQ7L1I2 683 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 SMCR8Q8TEV9 937 aaPredicted RBP16.34■□□□□ 0.21
CNOT3-201ENST00000221232 RBM17Q96I25 401 aaKnown RBP16.34■□□□□ 0.21
CNOT3-201ENST00000221232 GDAP1L1Q96MZ0 367 aa16.34■□□□□ 0.21
CNOT3-201ENST00000221232 CACNB3P54284 484 aa16.33■□□□□ 0.21
CNOT3-201ENST00000221232 VSNL1P62760 191 aa16.33■□□□□ 0.21
CNOT3-201ENST00000221232 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.21
CNOT3-201ENST00000221232 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.21
CNOT3-201ENST00000221232 KCNK18Q7Z418 384 aa16.33■□□□□ 0.21
CNOT3-201ENST00000221232 CCDC155Q8N6L0 562 aa16.33■□□□□ 0.21
CNOT3-201ENST00000221232 NEK11Q8NG66 645 aa16.33■□□□□ 0.21
CNOT3-201ENST00000221232 DHTKD1Q96HY7 919 aaPredicted RBP16.33■□□□□ 0.21
CNOT3-201ENST00000221232 MMRN2Q9H8L6 949 aa16.33■□□□□ 0.21
CNOT3-201ENST00000221232 NHEJ1Q9H9Q4 299 aaPredicted RBP16.33■□□□□ 0.21
CNOT3-201ENST00000221232 SNED1Q8TER0 1413 aa16.33■□□□□ 0.21
CNOT3-201ENST00000221232 COL5A3P25940 1745 aaPredicted RBP16.33■□□□□ 0.2
CNOT3-201ENST00000221232 LAD1O00515 517 aa16.33■□□□□ 0.2
CNOT3-201ENST00000221232 ZNF185O15231 689 aa16.33■□□□□ 0.2
CNOT3-201ENST00000221232 SRGNP10124 158 aa16.33■□□□□ 0.2
CNOT3-201ENST00000221232 FECHP22830 423 aa16.33■□□□□ 0.2
CNOT3-201ENST00000221232 PRPHP41219 470 aa16.33■□□□□ 0.2
CNOT3-201ENST00000221232 CCDC96Q2M329 555 aa16.33■□□□□ 0.2
CNOT3-201ENST00000221232 SHROOM1Q2M3G4 852 aaPredicted RBP16.33■□□□□ 0.2
CNOT3-201ENST00000221232 KANSL2Q9H9L4 492 aa16.33■□□□□ 0.2
CNOT3-201ENST00000221232 ZNHIT6Q9NWK9 470 aaKnown RBP16.33■□□□□ 0.2
CNOT3-201ENST00000221232 MTMR4Q9NYA4 1195 aa16.33■□□□□ 0.2
CNOT3-201ENST00000221232 ROBO3Q96MS0 1386 aa16.33■□□□□ 0.2
CNOT3-201ENST00000221232 VGLL3A8MV65 326 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 EPHB6O15197 1021 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 SNX29Q8TEQ0 813 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 KIAA1551Q9HCM1 1747 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 H3BQF6 201 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 EDIL3O43854 480 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 N4BP1O75113 896 aaKnown RBP16.32■□□□□ 0.2
CNOT3-201ENST00000221232 PHACTR2O75167 634 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 IL1R1P14778 569 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 ADCY7P51828 1080 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 SNAP25P60880 206 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 MRPS25P82663 173 aaKnown RBP16.32■□□□□ 0.2
CNOT3-201ENST00000221232 TCP10Q12799 353 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 JAKMIP2Q96AA8 810 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 AK8Q96MA6 479 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 TRERF1Q96PN7 1200 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 PNMA5Q96PV4 448 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 PSMB7Q99436 277 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 C7orf25Q9BPX7 421 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 PDE11AQ9HCR9 933 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 BLOC1S4Q9NUP1 217 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 USP40Q9NVE5 1235 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 AMPD3Q01432 767 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 ECM1Q16610 540 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 MIIPQ5JXC2 388 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 DNAJC7Q99615 494 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 TANGO6Q9C0B7 1094 aa16.32■□□□□ 0.2
CNOT3-201ENST00000221232 TNRC6CQ9HCJ0 1690 aaKnown RBP16.31■□□□□ 0.2
CNOT3-201ENST00000221232 PLCG2P16885 1265 aa16.31■□□□□ 0.2
CNOT3-201ENST00000221232 MEX3CQ5U5Q3 659 aaKnown RBP16.31■□□□□ 0.2
CNOT3-201ENST00000221232 ADGRF4Q8IZF3 695 aa16.31■□□□□ 0.2
CNOT3-201ENST00000221232 ANKRD13CQ8N6S4 541 aa16.31■□□□□ 0.2
CNOT3-201ENST00000221232 MMS19Q96T76 1030 aa16.31■□□□□ 0.2
CNOT3-201ENST00000221232 PCDHAC2Q9Y5I4 1007 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms