RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 PWP2Q15269 919 aaKnown RBP18.6■□□□□ 0.57
NME3-201ENST00000219302 RAB30Q15771 203 aa18.6■□□□□ 0.57
NME3-201ENST00000219302 CCDC96Q2M329 555 aa18.6■□□□□ 0.57
NME3-201ENST00000219302 ANKRD45Q5TZF3 282 aa18.6■□□□□ 0.57
NME3-201ENST00000219302 SYDE2Q5VT97 1194 aa18.6■□□□□ 0.57
NME3-201ENST00000219302 OTOP2Q7RTS6 562 aa18.6■□□□□ 0.57
NME3-201ENST00000219302 CLEC4DQ8WXI8 215 aa18.6■□□□□ 0.57
NME3-201ENST00000219302 GAS2L1Q99501 681 aaPredicted RBP18.6■□□□□ 0.57
NME3-201ENST00000219302 ALDH8A1Q9H2A2 487 aaPredicted RBP18.6■□□□□ 0.57
NME3-201ENST00000219302 CHD7Q9P2D1 2997 aa18.6■□□□□ 0.57
NME3-201ENST00000219302 ADD3Q9UEY8 706 aaKnown RBP18.6■□□□□ 0.57
NME3-201ENST00000219302 MSRAQ9UJ68 235 aa18.6■□□□□ 0.57
NME3-201ENST00000219302 YBX2Q9Y2T7 364 aaKnown RBP18.6■□□□□ 0.57
NME3-201ENST00000219302 FAM227BQ96M60 508 aa18.59■□□□□ 0.57
NME3-201ENST00000219302 WDR11Q9BZH6 1224 aa18.59■□□□□ 0.57
NME3-201ENST00000219302 MTIF3Q9H2K0 278 aaKnown RBP18.59■□□□□ 0.57
NME3-201ENST00000219302 NKX2-4Q9H2Z4 354 aa18.59■□□□□ 0.57
NME3-201ENST00000219302 FRMPD2Q68DX3 1309 aaPredicted RBP18.58■□□□□ 0.57
NME3-201ENST00000219302 PDHBP11177 359 aa18.58■□□□□ 0.56
NME3-201ENST00000219302 PDE1AP54750 535 aa18.58■□□□□ 0.56
NME3-201ENST00000219302 PURAQ00577 322 aaKnown RBP18.58■□□□□ 0.56
NME3-201ENST00000219302 MCMDC2Q4G0Z9 681 aa18.58■□□□□ 0.56
NME3-201ENST00000219302 TICAM2Q86XR7 235 aa18.58■□□□□ 0.56
NME3-201ENST00000219302 RPUSD2Q8IZ73 545 aaKnown RBP18.58■□□□□ 0.56
NME3-201ENST00000219302 GPCPD1Q9NPB8 672 aa18.58■□□□□ 0.56
NME3-201ENST00000219302 A0A0D9SFI3 127 aa18.57■□□□□ 0.56
NME3-201ENST00000219302 HSPD1P10809 573 aaKnown RBP18.57■□□□□ 0.56
NME3-201ENST00000219302 RRP12Q5JTH9 1297 aaKnown RBP18.57■□□□□ 0.56
NME3-201ENST00000219302 SLC30A10Q6XR72 485 aa18.57■□□□□ 0.56
NME3-201ENST00000219302 ATXN2LQ8WWM7 1075 aaKnown RBP18.57■□□□□ 0.56
NME3-201ENST00000219302 PPM1EQ8WY54 764 aa18.57■□□□□ 0.56
NME3-201ENST00000219302 SCLYQ96I15 445 aa18.57■□□□□ 0.56
NME3-201ENST00000219302 TTC14Q96N46 770 aa18.57■□□□□ 0.56
NME3-201ENST00000219302 SLC28A3Q9HAS3 691 aa18.57■□□□□ 0.56
NME3-201ENST00000219302 TRMT13Q9NUP7 481 aaKnown RBP18.57■□□□□ 0.56
NME3-201ENST00000219302 POLR3EQ9NVU0 708 aa18.57■□□□□ 0.56
NME3-201ENST00000219302 PTPDC1A2A3K4 754 aa18.56■□□□□ 0.56
NME3-201ENST00000219302 SUPT20HL2P0C7V6 817 aa18.56■□□□□ 0.56
NME3-201ENST00000219302 SNHG28P0DPA3 235 aa18.56■□□□□ 0.56
NME3-201ENST00000219302 EDNRBP24530 442 aa18.56■□□□□ 0.56
NME3-201ENST00000219302 RABGGTBP53611 331 aa18.56■□□□□ 0.56
NME3-201ENST00000219302 TOMM22Q9NS69 142 aa18.56■□□□□ 0.56
NME3-201ENST00000219302 SLC4A7Q9Y6M7 1214 aa18.56■□□□□ 0.56
NME3-201ENST00000219302 CYP2C9P11712 490 aa18.55■□□□□ 0.56
NME3-201ENST00000219302 CPT1AP50416 773 aa18.55■□□□□ 0.56
NME3-201ENST00000219302 RPS6P62753 249 aaKnown RBP18.55■□□□□ 0.56
NME3-201ENST00000219302 ZNF543Q08ER8 600 aa18.55■□□□□ 0.56
NME3-201ENST00000219302 RNF207Q6ZRF8 634 aa18.55■□□□□ 0.56
NME3-201ENST00000219302 ZNF589Q86UQ0 364 aaPredicted RBP18.55■□□□□ 0.56
NME3-201ENST00000219302 ASB2Q96Q27 587 aa18.55■□□□□ 0.56
NME3-201ENST00000219302 PNMA2Q9UL42 364 aa18.55■□□□□ 0.56
NME3-201ENST00000219302 TNKSO95271 1327 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 ZMYM6O95789 1325 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 A6NJR5 290 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 MYL3P08590 195 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 MYOGP15173 224 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 IGFBP4P22692 258 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 CALML3P27482 149 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 HAND2P61296 217 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 HDAC1Q13547 482 aaPredicted RBP18.54■□□□□ 0.56
NME3-201ENST00000219302 TTLL4Q14679 1199 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 OR6J1Q8NGC5 347 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 MTG1Q9BT17 334 aaPredicted RBP18.54■□□□□ 0.56
NME3-201ENST00000219302 ZBTB47Q9UFB7 747 aaPredicted RBP18.54■□□□□ 0.56
NME3-201ENST00000219302 PCDHA11Q9Y5I1 949 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 NCOR1O75376 2440 aa18.54■□□□□ 0.56
NME3-201ENST00000219302 WDR19Q8NEZ3 1342 aa18.53■□□□□ 0.56
NME3-201ENST00000219302 TNFRSF10AO00220 468 aa18.53■□□□□ 0.56
NME3-201ENST00000219302 NKRFO15226 690 aaKnown RBP eCLIP18.53■□□□□ 0.56
NME3-201ENST00000219302 PFKMP08237 780 aa18.53■□□□□ 0.56
NME3-201ENST00000219302 PCP11498 1178 aaKnown RBP18.53■□□□□ 0.56
NME3-201ENST00000219302 NMIQ13287 307 aaPredicted RBP18.53■□□□□ 0.56
NME3-201ENST00000219302 CCDC85BQ15834 202 aaPredicted RBP18.53■□□□□ 0.56
NME3-201ENST00000219302 NBPF20Q3BBV1 942 aa18.53■□□□□ 0.56
NME3-201ENST00000219302 RGS22Q8NE09 1264 aa18.53■□□□□ 0.56
NME3-201ENST00000219302 DNERQ8NFT8 737 aa18.53■□□□□ 0.56
NME3-201ENST00000219302 GBF1Q92538 1859 aa18.53■□□□□ 0.56
NME3-201ENST00000219302 COPS5Q92905 334 aa18.53■□□□□ 0.56
NME3-201ENST00000219302 THEGQ9P2T0 379 aa18.53■□□□□ 0.56
NME3-201ENST00000219302 SCN10AQ9Y5Y9 1956 aa18.53■□□□□ 0.56
NME3-201ENST00000219302 RRP1P56182 461 aaKnown RBP18.52■□□□□ 0.56
NME3-201ENST00000219302 PDE4DQ08499 809 aa18.52■□□□□ 0.56
NME3-201ENST00000219302 NFRKBQ6P4R8 1299 aa18.52■□□□□ 0.56
NME3-201ENST00000219302 MFSD6Q6ZSS7 791 aa18.52■□□□□ 0.56
NME3-201ENST00000219302 TBC1D10CQ8IV04 446 aa18.52■□□□□ 0.56
NME3-201ENST00000219302 SCFD2Q8WU76 684 aa18.52■□□□□ 0.56
NME3-201ENST00000219302 CRBNQ96SW2 442 aa18.52■□□□□ 0.56
NME3-201ENST00000219302 GPHNQ9NQX3 736 aaPredicted RBP18.52■□□□□ 0.56
NME3-201ENST00000219302 KPNA6O60684 536 aa18.51■□□□□ 0.55
NME3-201ENST00000219302 ATP2A2P16615 1042 aaKnown RBP18.51■□□□□ 0.55
NME3-201ENST00000219302 MRPS5P82675 430 aaKnown RBP18.51■□□□□ 0.55
NME3-201ENST00000219302 PPP2R5BQ15173 497 aa18.51■□□□□ 0.55
NME3-201ENST00000219302 DEFB128Q7Z7B8 93 aa18.51■□□□□ 0.55
NME3-201ENST00000219302 PPP1R13LQ8WUF5 828 aa18.51■□□□□ 0.55
NME3-201ENST00000219302 CCDC171Q6TFL3 1326 aa18.5■□□□□ 0.55
NME3-201ENST00000219302 ZBBXA8MT70 800 aa18.5■□□□□ 0.55
NME3-201ENST00000219302 ARIH2O95376 493 aa18.5■□□□□ 0.55
NME3-201ENST00000219302 IQCF3P0C7M6 154 aa18.5■□□□□ 0.55
NME3-201ENST00000219302 GOLGA8HP0CJ92 632 aa18.5■□□□□ 0.55
NME3-201ENST00000219302 TXNP10599 105 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms