RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 RNF207Q6ZRF8 634 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 ZNF280CQ8ND82 737 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 RSPH14Q9UHP6 348 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 STRCQ7RTU9 1775 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 UBE2Q2LH0YL09 131 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 hCG_1984214I3L0E3 225 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 TRAF5O00463 557 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 PFKFB3Q16875 520 aaPredicted RBP10.47□□□□□ -0.73
CCDC113-201ENST00000219299 ZNF713Q8N859 430 aaPredicted RBP10.47□□□□□ -0.73
CCDC113-201ENST00000219299 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 PHACTR2O75167 634 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 CELF2O95319 508 aaKnown RBP10.47□□□□□ -0.73
CCDC113-201ENST00000219299 TRAPPC10P48553 1259 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 SMTNP53814 917 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 SLC39A14Q15043 492 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 SLFN12Q8IYM2 578 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 SRBD1Q8N5C6 995 aaKnown RBP10.47□□□□□ -0.73
CCDC113-201ENST00000219299 NT5C3AQ9H0P0 336 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 TUBB4BP68371 445 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 UTP14CQ5TAP6 766 aaKnown RBP10.47□□□□□ -0.73
CCDC113-201ENST00000219299 VPS36Q86VN1 386 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 CERS5Q8N5B7 392 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 IFT74Q96LB3 600 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 ZNF577Q9BSK1 485 aa10.47□□□□□ -0.73
CCDC113-201ENST00000219299 PARP4Q9UKK3 1724 aaKnown RBP10.47□□□□□ -0.73
CCDC113-201ENST00000219299 MYZAPP0CAP1 466 aa10.46□□□□□ -0.73
CCDC113-201ENST00000219299 INPP5BP32019 993 aa10.46□□□□□ -0.73
CCDC113-201ENST00000219299 SPAG1Q07617 926 aa10.46□□□□□ -0.73
CCDC113-201ENST00000219299 APOBEC3HQ6NTF7 200 aaKnown RBP10.46□□□□□ -0.73
CCDC113-201ENST00000219299 TEKT3Q9BXF9 490 aa10.46□□□□□ -0.73
CCDC113-201ENST00000219299 ANO3Q9BYT9 981 aa10.46□□□□□ -0.73
CCDC113-201ENST00000219299 NYAP2Q9P242 653 aa10.46□□□□□ -0.73
CCDC113-201ENST00000219299 PCDHB6Q9Y5E3 794 aa10.46□□□□□ -0.73
CCDC113-201ENST00000219299 ZNF157P51786 506 aaPredicted RBP10.46□□□□□ -0.73
CCDC113-201ENST00000219299 TTC31Q49AM3 519 aaPredicted RBP10.46□□□□□ -0.73
CCDC113-201ENST00000219299 MYCT1Q8N699 235 aa10.46□□□□□ -0.73
CCDC113-201ENST00000219299 RMDN3Q96TC7 470 aa10.46□□□□□ -0.73
CCDC113-201ENST00000219299 TRPC6Q9Y210 931 aa10.46□□□□□ -0.73
CCDC113-201ENST00000219299 TCRBV5S4A2TA0A5A2 114 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 NR1I2O75469 434 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 STAT3P40763 770 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 ZNF543Q08ER8 600 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 SPECC1LQ69YQ0 1117 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 CCDC91Q7Z6B0 441 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 GPC2Q8N158 579 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 RBM46Q8TBY0 533 aaKnown RBP10.46□□□□□ -0.74
CCDC113-201ENST00000219299 RASSF4Q9H2L5 321 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 SUGCTQ9HAC7 445 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 KARSQ15046 597 aaKnown RBP10.46□□□□□ -0.74
CCDC113-201ENST00000219299 POSTNQ15063 836 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 USP37Q86T82 979 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 ANKRD13AQ8IZ07 590 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 VCPKMTQ9H867 229 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 DNAI1Q9UI46 699 aa10.46□□□□□ -0.74
CCDC113-201ENST00000219299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.46□□□□□ -0.74
CCDC113-201ENST00000219299 SALL1Q9NSC2 1324 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 ERCC3P19447 782 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 RCAN1P53805 252 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 COG2Q14746 738 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 EHBP1Q8NDI1 1231 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 ACER1Q8TDN7 264 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 DPF2Q92785 391 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 SPAG5Q96R06 1193 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 VPS33BQ9H267 617 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CLSTN2Q9H4D0 955 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CMA1P23946 247 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 GUCY1A2P33402 732 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 GABPB1Q06547 395 aaPredicted RBP10.45□□□□□ -0.74
CCDC113-201ENST00000219299 XKR9Q5GH70 373 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 FASTKD5Q7L8L6 764 aaKnown RBP10.45□□□□□ -0.74
CCDC113-201ENST00000219299 METTL13Q8N6R0 699 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 ALS2CR12Q96Q35 445 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 TMX1Q9H3N1 280 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 BICDL2A1A5D9 508 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CAPN2P17655 700 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 OXER1Q8TDS5 423 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 SYMPKQ92797 1274 aaKnown RBP10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CCDC113Q9H0I3 377 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CSRNP2Q9H175 543 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 DDX4Q9NQI0 724 aaKnown RBP10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CTAGE15A4D2H0 777 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CTNND1O60716 968 aaKnown RBP10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CTAGE8P0CG41 777 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 GCFC2P16383 781 aaKnown RBP10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CKAP4Q07065 602 aaKnown RBP10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CNNM4Q6P4Q7 775 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CTAGE6Q86UF2 777 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 CTAGE4Q8IX94 777 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 NELFCDQ8IXH7 590 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 PUF60Q9UHX1 559 aaKnown RBP10.45□□□□□ -0.74
CCDC113-201ENST00000219299 KIAA1024Q9UPX6 916 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 PCDHAC2Q9Y5I4 1007 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 STK24Q9Y6E0 443 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 V9GYY5 206 aaPredicted RBP10.45□□□□□ -0.74
CCDC113-201ENST00000219299 RIC1Q4ADV7 1423 aa10.45□□□□□ -0.74
CCDC113-201ENST00000219299 PDS5AQ29RF7 1337 aaKnown RBP10.45□□□□□ -0.74
CCDC113-201ENST00000219299 PDHBP11177 359 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 OTUD6AQ7L8S5 288 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 LDHDQ86WU2 507 aa10.44□□□□□ -0.74
CCDC113-201ENST00000219299 FAM163AQ96GL9 167 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms